RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 BBS10Q8TAM1 723 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 DYNC2LI1Q8TCX1 351 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 MRGPRX1Q96LB2 322 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 GABARAPL3Q9BY60 117 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 WASH6PQ9NQA3 447 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 DZANK1Q9NVP4 752 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF624Q9P2J8 865 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 HEBP2Q9Y5Z4 205 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 CLCA3PQ9Y6N3 262 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 MAU2Q9Y6X3 613 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 C2orf92A0A1B0GVN3 265 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CD8B2A6NJW9 211 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TMEM229AB2RXF0 380 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CD8BP10966 210 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 NDUFV2P19404 249 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TCEA1P23193 301 aaKnown RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 RELAQ04206 551 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF267Q14586 743 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TRAM2Q15035 370 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 PLBD1Q6P4A8 553 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SLC46A3Q7Z3Q1 461 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 ABCA7Q8IZY2 2146 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 NLGN4YQ8NFZ3 816 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SECISBP2Q96T21 854 aaKnown RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TIMM29Q9BSF4 260 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 PRDM7Q9NQW5 492 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SEMA4GQ9NTN9 838 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 FAM186AA6NE01 2351 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 NPIPB8E9PQR5 432 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CTSVO60911 334 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 UGT2B7P16662 529 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 HNRNPA2B1P22626 353 aaKnown RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CD40LGP29965 261 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TPMTP51580 245 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 PCBP3P57721 371 aaKnown RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SNRPNP63162 240 aaKnown RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 LRIT3Q3SXY7 679 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SLC48A1Q6P1K1 146 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 RTL10Q7L3V2 364 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CSNK1A1LQ8N752 337 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SYT14Q8NB59 555 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 OR4C15Q8NGM1 316 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CREB3L4Q8TEY5 395 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SLC22A18Q96BI1 424 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TBC1D20Q96BZ9 403 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 WDR34Q96EX3 536 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 HHIPQ96QV1 700 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 ACSS1Q9NUB1 689 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 FBXO34Q9NWN3 711 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CD207Q9UJ71 328 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SPAG17Q6Q759 2223 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SERTM1A2A2V5 107 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 A8MVJ9 347 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 PEX12O00623 359 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SEMA4FO95754 770 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 KRT8P05787 483 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 ALOX5P09917 674 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 TRIM23P36406 574 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 Q6ZS52 159 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CPOQ8IVL8 374 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 ALDH16A1Q8IZ83 802 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CAMKVQ8NCB2 501 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CAPSLQ8WWF8 208 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 CRELD1Q96HD1 420 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 GPA33Q99795 319 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 SLC7A5P2Q9GIP4 190 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 A4GALTQ9NPC4 353 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
SMPD4-213ENST00000454468 PLD2O14939 933 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 P2RX6O15547 441 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 SNRNP200O75643 2136 aaKnown RBP11.21□□□□□ -0.61
SMPD4-213ENST00000454468 THEGLP0DJG4 465 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 NAT2P11245 290 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 PRG2P13727 222 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 CPMP14384 443 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 ABATP80404 500 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 IFITM3Q01628 133 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 DUSP5Q16690 384 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 GXYLT1Q4G148 440 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 ARL9Q6T311 187 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 FAM3CQ92520 227 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 SLC35A4Q96G79 324 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 TOE1Q96GM8 510 aaKnown RBP11.21□□□□□ -0.61
SMPD4-213ENST00000454468 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 PITX2Q99697 317 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 MND1Q9BWT6 205 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 BEX2Q9BXY8 128 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 MMP27Q9H306 513 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 SYNPO2LQ9H987 977 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 PMF1-BGLAPU3KQ54 211 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 PLXND1Q9Y4D7 1925 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 SPEGQ15772 3267 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 KNTC1P50748 2209 aa11.21□□□□□ -0.61
SMPD4-213ENST00000454468 A0A0A6YYD5 115 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 TRIM64A6NGJ6 449 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 DUXAA6NLW8 204 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ZAR1LA6NP61 321 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ADAM23O75077 832 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms