RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ANKRA2Q9H9E1 313 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 KLK13Q9UKR3 277 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 MGAT4BQ9UQ53 548 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 ENTPD2Q9Y5L3 495 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 TPRP12270 2363 aaKnown RBP10.01□□□□□ -0.81
PKP4-206ENST00000452162 C2orf74A8MZ97 194 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 NTN3O00634 580 aaPredicted RBP10.01□□□□□ -0.81
PKP4-206ENST00000452162 DNAJB6O75190 326 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 CPN2P22792 545 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 BUD31P41223 144 aaPredicted RBP10.01□□□□□ -0.81
PKP4-206ENST00000452162 GPR3P46089 330 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 SMIM11AP58511 58 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 FOXD4Q12950 439 aaPredicted RBP10.01□□□□□ -0.81
PKP4-206ENST00000452162 DEFB134Q4QY38 66 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 DCST1Q5T197 706 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 UBE2UQ5VVX9 321 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 CDCP2Q5VXM1 449 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 PGBD2Q6P3X8 592 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 CCDC81Q6ZN84 652 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 USP53Q70EK8 1073 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 TMPRSS7Q7RTY8 843 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 TMPRSS9Q7Z410 1059 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
PKP4-206ENST00000452162 CAMKVQ8NCB2 501 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 RSC1A1Q92681 617 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 GGHQ92820 318 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 KAT2AQ92830 837 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 ZFYVE21Q9BQ24 234 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 PINK1Q9BXM7 581 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 UCK2Q9BZX2 261 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 SLC38A1Q9H2H9 487 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 PRDM9Q9NQV7 894 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 DAPP1Q9UN19 280 aa10.01□□□□□ -0.81
PKP4-206ENST00000452162 IGHV1OR21-1A0A087WYE8 117 aa10□□□□□ -0.81
PKP4-206ENST00000452162 A0A1W2PRQ8 180 aa10□□□□□ -0.81
PKP4-206ENST00000452162 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
PKP4-206ENST00000452162 URADA6NGE7 173 aa10□□□□□ -0.81
PKP4-206ENST00000452162 CLCA1A8K7I4 914 aa10□□□□□ -0.81
PKP4-206ENST00000452162 M0R129 80 aa10□□□□□ -0.81
PKP4-206ENST00000452162 B3GALT2O43825 422 aa10□□□□□ -0.81
PKP4-206ENST00000452162 SLITRK5O94991 958 aa10□□□□□ -0.81
PKP4-206ENST00000452162 BCL10O95999 233 aa10□□□□□ -0.81
PKP4-206ENST00000452162 MT-CO3P00414 261 aa10□□□□□ -0.81
PKP4-206ENST00000452162 CDK1P06493 297 aa10□□□□□ -0.81
PKP4-206ENST00000452162 INHBBP09529 407 aa10□□□□□ -0.81
PKP4-206ENST00000452162 PVRP15151 417 aa10□□□□□ -0.81
PKP4-206ENST00000452162 CD1CP29017 333 aa10□□□□□ -0.81
PKP4-206ENST00000452162 DGCR6Q14129 220 aa10□□□□□ -0.81
PKP4-206ENST00000452162 GPAT3Q53EU6 434 aa10□□□□□ -0.81
PKP4-206ENST00000452162 TMEM236Q5W0B7 351 aa10□□□□□ -0.81
PKP4-206ENST00000452162 FAM111BQ6SJ93 734 aa10□□□□□ -0.81
PKP4-206ENST00000452162 FAM92BQ6ZTR7 304 aa10□□□□□ -0.81
PKP4-206ENST00000452162 RNF44Q7L0R7 432 aa10□□□□□ -0.81
PKP4-206ENST00000452162 HMGN2P46Q86SG4 172 aa10□□□□□ -0.81
PKP4-206ENST00000452162 OR7G2Q8NG99 324 aa10□□□□□ -0.81
PKP4-206ENST00000452162 TRNT1Q96Q11 434 aaKnown RBP10□□□□□ -0.81
PKP4-206ENST00000452162 ACTRT3Q9BYD9 372 aa10□□□□□ -0.81
PKP4-206ENST00000452162 EQTNQ9NQ60 294 aa10□□□□□ -0.81
PKP4-206ENST00000452162 MAN2C1Q9NTJ4 1040 aa10□□□□□ -0.81
PKP4-206ENST00000452162 IMPAD1Q9NX62 359 aa10□□□□□ -0.81
PKP4-206ENST00000452162 GIN1Q9NXP7 522 aa10□□□□□ -0.81
PKP4-206ENST00000452162 CLCA2Q9UQC9 943 aa10□□□□□ -0.81
PKP4-206ENST00000452162 SLC9A8Q9Y2E8 581 aa10□□□□□ -0.81
PKP4-206ENST00000452162 MRPS2Q9Y399 296 aaKnown RBP10□□□□□ -0.81
PKP4-206ENST00000452162 SLC22A7Q9Y694 548 aa10□□□□□ -0.81
PKP4-206ENST00000452162 A0A0J9YY10 115 aa10□□□□□ -0.81
PKP4-206ENST00000452162 H0YGG7 62 aa10□□□□□ -0.81
PKP4-206ENST00000452162 UGT2B17O75795 530 aa10□□□□□ -0.81
PKP4-206ENST00000452162 ZBTB11O95625 1053 aaPredicted RBP10□□□□□ -0.81
PKP4-206ENST00000452162 LCKP06239 509 aa10□□□□□ -0.81
PKP4-206ENST00000452162 OSMP13725 252 aa10□□□□□ -0.81
PKP4-206ENST00000452162 NR4A1P22736 598 aa10□□□□□ -0.81
PKP4-206ENST00000452162 PSMB9P28065 219 aa10□□□□□ -0.81
PKP4-206ENST00000452162 ENTPD1P49961 510 aa10□□□□□ -0.81
PKP4-206ENST00000452162 XKP51811 444 aa10□□□□□ -0.81
PKP4-206ENST00000452162 PDX1P52945 283 aa10□□□□□ -0.81
PKP4-206ENST00000452162 NUDT6P53370 316 aa10□□□□□ -0.81
PKP4-206ENST00000452162 UGT2B15P54855 530 aa10□□□□□ -0.81
PKP4-206ENST00000452162 CDC42P60953 191 aa10□□□□□ -0.81
PKP4-206ENST00000452162 ARF3P61204 181 aaPredicted RBP10□□□□□ -0.81
PKP4-206ENST00000452162 CFHR1Q03591 330 aa10□□□□□ -0.81
PKP4-206ENST00000452162 PIN1Q13526 163 aaPredicted RBP10□□□□□ -0.81
PKP4-206ENST00000452162 TBCEQ15813 527 aaPredicted RBP10□□□□□ -0.81
PKP4-206ENST00000452162 ABHD13Q7L211 337 aa10□□□□□ -0.81
PKP4-206ENST00000452162 TMPRSS12Q86WS5 348 aa10□□□□□ -0.81
PKP4-206ENST00000452162 SAMD14Q8IZD0 417 aaPredicted RBP10□□□□□ -0.81
PKP4-206ENST00000452162 OR4K14Q8NGD5 310 aa10□□□□□ -0.81
PKP4-206ENST00000452162 OR6T1Q8NGN1 323 aa10□□□□□ -0.81
PKP4-206ENST00000452162 SLC7A13Q8TCU3 470 aa10□□□□□ -0.81
PKP4-206ENST00000452162 FCGR1BQ92637 280 aa10□□□□□ -0.81
PKP4-206ENST00000452162 MYDGFQ969H8 173 aa10□□□□□ -0.81
PKP4-206ENST00000452162 PRRC1Q96M27 445 aa10□□□□□ -0.81
PKP4-206ENST00000452162 MS4A4EQ96PG1 132 aa10□□□□□ -0.81
PKP4-206ENST00000452162 GFM1Q96RP9 751 aaKnown RBP10□□□□□ -0.81
PKP4-206ENST00000452162 NUDT22Q9BRQ3 303 aa10□□□□□ -0.81
PKP4-206ENST00000452162 LYRM4Q9HD34 91 aa10□□□□□ -0.81
PKP4-206ENST00000452162 NDOR1Q9UHB4 597 aa10□□□□□ -0.81
PKP4-206ENST00000452162 LIPT1Q9Y234 373 aa10□□□□□ -0.81
PKP4-206ENST00000452162 SCN3AQ9NY46 2000 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 ANKRD33BA6NCL7 494 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms