RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DDX5P17844 614 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 PRPS1L1P21108 318 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 CLDN8P56748 225 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 MRPS22P82650 360 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 CRYZQ08257 329 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 MAD2L1Q13257 205 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 VASNQ6EMK4 673 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 OR5M10Q6IEU7 315 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 ACAD11Q709F0 780 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 PLCZ1Q86YW0 608 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 FAM83FQ8NEG4 500 aaPredicted RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 GPR151Q8TDV0 419 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 CA5BP1Q8WTZ4 195 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 PIK3R3Q92569 461 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 C16orf58Q96GQ5 468 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 PRPF18Q99633 342 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 NUF2Q9BZD4 464 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 C3orf14Q9HBI5 128 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 ASIC5Q9NY37 505 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 NOP53Q9NZM5 478 aaKnown RBP11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 RNF6Q9Y252 685 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 PCDHGB3Q9Y5G1 929 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 WIF1Q9Y5W5 379 aa11.61□□□□□ -0.55
PRPF40A-203ENST00000448428 MED12Q93074 2177 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 C17orf51A8MQB3 221 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 B4DXG7 233 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 C19orf84I3L1E1 186 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 NKX2-2O95096 273 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 IGKV1D-16P01601 117 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 HOXD4P09016 255 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 GABRA1P14867 456 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 BMP7P18075 431 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 EVI2BP34910 448 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 RFX3P48380 749 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 DIO3P55073 304 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 C21orf58P58505 322 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 NHSL2Q5HYW2 709 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 C1orf185Q5T7R7 199 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 MFSD12Q6NUT3 480 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 B3GNT6Q6ZMB0 384 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 CCDC71Q8IV32 467 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 KIRREL3Q8IZU9 778 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 NATD1Q8N6N6 113 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 CDRT4Q8N9R6 151 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 SLC16A11Q8NCK7 471 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 OR10Q1Q8NGQ4 319 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 LILRB4Q8NHJ6 448 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 ASB5Q8WWX0 329 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 OR5P2Q8WZ92 322 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 SLC9A6Q92581 669 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 ARL8AQ96BM9 186 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 FAM120BQ96EK7 910 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 MS4A4EQ96PG1 132 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 YIPF4Q9BSR8 244 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 UGT2B28Q9BY64 529 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 BHLHE41Q9C0J9 482 aaPredicted RBP11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 CHST11Q9NPF2 352 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 ATAD3AQ9NVI7 634 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 NKIRAS1Q9NYS0 192 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 FBXL2Q9UKC9 423 aa11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 MRTO4Q9UKD2 239 aaKnown RBP11.6□□□□□ -0.55
PRPF40A-203ENST00000448428 KIAA1549Q9HCM3 1950 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 A0A0G2JNJ9 132 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 AHRRA9YTQ3 701 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 HNRNPRO43390 633 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 SCO2O43819 266 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 SNNO75324 88 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 KCNH1O95259 989 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 C6orf47O95873 294 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 ACP2P11117 423 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 CHRNB4P30926 498 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 ADH7P40394 386 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 KIR3DL1P43629 444 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 CCT3P49368 545 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 DUSP5Q16690 384 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 PGS1Q32NB8 556 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 LSM12Q3MHD2 195 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 VPS26BQ4G0F5 336 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 EXOSC6Q5RKV6 272 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 DCST1Q5T197 706 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 AGBL2Q5U5Z8 902 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 ZCCHC12Q6PEW1 402 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 MARCH3Q86UD3 253 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 ULK2Q8IYT8 1036 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 PSMA8Q8TAA3 256 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 FBXO30Q8TB52 745 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 FAM110BQ8TC76 370 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 ABTB1Q969K4 478 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 MARVELD3Q96A59 401 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 RMND5BQ96G75 393 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 WDYHV1Q96HA8 205 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 DUSP26Q9BV47 211 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 UCK2Q9BZX2 261 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 OR2B2Q9GZK3 357 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 PRDM14Q9GZV8 571 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 CXorf36Q9H7Y0 433 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 MANSC1Q9H8J5 431 aa11.59□□□□□ -0.55
PRPF40A-203ENST00000448428 MEAF6Q9HAF1 191 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms