RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 HTR2BP41595 481 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 INPP1P49441 399 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 GPLD1P80108 840 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 PRDX1Q06830 199 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 ELAVL3Q14576 367 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 ZIC1Q15915 447 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 PGGHGQ32M88 737 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF697Q5TEC3 545 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 MRM1Q6IN84 353 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF322Q6U7Q0 402 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 CREB3L2Q70SY1 520 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 DEDD2Q8WXF8 326 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 TTC9Q92623 222 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 CNRIP1Q96F85 164 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 C16orf58Q96GQ5 468 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 CALML5Q9NZT1 146 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 CHST2Q9Y4C5 530 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 GLOD5A6NK44 160 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 J3QRE1 110 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 ERAL1O75616 437 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 TRHRP34981 398 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 PRR5P85299 388 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 MAB21L1Q13394 359 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF791Q3KP31 576 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 VRK2Q86Y07 508 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 CCDC116Q8IYX3 515 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 NXPE3Q969Y0 559 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 OR7D2Q96RA2 312 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 SECISBP2Q96T21 854 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 PAK6Q9NQU5 681 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 MCUBQ9NWR8 336 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 A0A1W2PR48 441 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ISM1B1AKI9 464 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 PGRMC2O15173 223 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 FRS3O43559 492 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 CH25HO95992 272 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 PRKAR1BP31321 381 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 MTNR1BP49286 362 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 RNF144AP50876 292 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-204ENST00000447182 CTBP2P56545 445 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 BTG1P62324 171 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 DUSP2Q05923 314 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 TGM3Q08188 693 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 INSL4Q14641 139 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 PIP5KL1Q5T9C9 394 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF620Q6ZNG0 422 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF767PQ75MW2 155 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 C11orf74Q86VG3 221 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 CXorf40AQ8TE69 158 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 IRF2BPLQ9H1B7 796 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 KLHL31Q9H511 634 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 TM7SF3Q9NS93 570 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 CES1P1Q9UKY3 287 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 LOC102723532A0A0G2JNH3 316 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 C2orf92A0A1B0GVN3 265 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 CD8B2A6NJW9 211 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 PRRT4C9JH25 899 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 INMT-MINDY4F8WBC2 141 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 EMC8O43402 210 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 CD8BP10966 210 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 HIST1H1TP22492 207 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-204ENST00000447182 PTGER1P34995 402 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 FNDC3BQ53EP0 1204 aaKnown RBP17.86■□□□□ 0.45
SDCBP-204ENST00000447182 LAMTOR1Q6IAA8 161 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 TMEM107Q6UX40 140 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ADCK2Q7Z695 626 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 RAB42Q8N4Z0 105 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ANGPTL6Q8NI99 470 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 AKAP1Q92667 903 aaKnown RBP eCLIP17.86■□□□□ 0.45
SDCBP-204ENST00000447182 SNAPC3Q92966 411 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ZG16BQ96DA0 208 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 KCNN2Q9H2S1 579 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 POLMQ9NP87 494 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-204ENST00000447182 TNFRSF10DQ9UBN6 386 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ENTPD4Q9Y227 616 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 ATG4BQ9Y4P1 393 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 IRAK3Q9Y616 596 aa17.86■□□□□ 0.45
SDCBP-204ENST00000447182 GTPBP1O00178 669 aaKnown RBP17.85■□□□□ 0.45
SDCBP-204ENST00000447182 AGRPO00253 132 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 RGS9O75916 674 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-204ENST00000447182 OR2B3O76000 313 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 NTN1O95631 604 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 HMGN1P05114 100 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 SLC35G4P0C7Q5 338 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 LINC00271P0C7V0 271 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 ALPPL2P10696 532 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 ELK1P19419 428 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 SLC6A1P30531 599 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 ARPC4P59998 168 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 CDK3Q00526 305 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 MESP2Q0VG99 397 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 TCEAL5Q5H9L2 206 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 MBOAT2Q6ZWT7 520 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 KLBQ86Z14 1044 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 NKAIN4Q8IVV8 208 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 BBS1Q8NFJ9 593 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 TOR1AIP2Q8NFQ8 470 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 OR2A1Q8NGT9 310 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 KLK6Q92876 244 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 MS4A6EQ96DS6 147 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms