RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CSNK2A2P19784 350 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PRPH2P23942 346 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 ACVR2AP27037 513 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PTGER4P35408 488 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 RPL38P63173 70 aaKnown RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 ACSM2AQ08AH3 577 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 FUT7Q11130 342 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 GALNTL6Q49A17 601 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 WLSQ5T9L3 541 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 ACSM2BQ68CK6 577 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 TRILQ7L0X0 811 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 SPATA19Q7Z5L4 167 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 LURAP1LQ8IV03 231 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 SAMD14Q8IZD0 417 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 FBXW8Q8N3Y1 598 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 FNDC5Q8NAU1 212 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 ASB5Q8WWX0 329 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 KISS1RQ969F8 398 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 TP53INP1Q96A56 240 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 TM4SF18Q96CE8 201 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 EBF4Q9BQW3 602 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 WDR55Q9H6Y2 383 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 UTS2RQ9UKP6 389 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 EIF3LQ9Y262 564 aaKnown RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 HRH3Q9Y5N1 445 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NPFFR2Q9Y5X5 522 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 LIPGQ9Y5X9 500 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 CHCHD2Q9Y6H1 151 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 INTS1Q8N201 2190 aaKnown RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NCOA6Q14686 2063 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NINQ8N4C6 2090 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 FAM90A27PA6NNH2 459 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 E9PBE3 544 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NPIPB8E9PQR5 432 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 UBDO15205 165 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 SUSD5O60279 629 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PLOD3O60568 738 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PEX11AO75192 247 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 SEC22BO75396 215 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 TRAPPC6AO75865 159 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PRKD3O94806 890 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 IGHG3P01860 377 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 GDF1P27539 372 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 CHRNB4P30926 498 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 FBXW4P57775 412 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 RPP38P78345 283 aaKnown RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NNATQ16517 81 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NTRK2Q16620 822 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 HYAL4Q2M3T9 481 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 EMC4Q5J8M3 183 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 OGFOD2Q6N063 350 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 B3GNT6Q6ZMB0 384 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PACS2Q86VP3 889 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PRR22Q8IZ63 422 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 MMP21Q8N119 569 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 RPRMLQ8N4K4 120 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 ADCY4Q8NFM4 1077 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 ZNF597Q96LX8 424 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 AKTIPQ9H8T0 292 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
USP6NL-203ENST00000443016 PTGDR2Q9Y5Y4 395 aa8.04□□□□□ -1.12
USP6NL-203ENST00000443016 MAP1AP78559 2803 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 C19orf84I3L1E1 186 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 AQP7O14520 342 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 PCDH7O60245 1069 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 ATP1B1P05026 303 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 RFPL3SP0C7P2 107 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 IDO1P14902 403 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 HMGCS1Q01581 520 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 HEPACAMQ14CZ8 416 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 LSM12Q3MHD2 195 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 FAM219BQ5XKK7 198 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 C16orf87Q6PH81 154 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 FAM111BQ6SJ93 734 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 LARP4Q71RC2 724 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CCDC71Q8IV32 467 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 LRRC25Q8N386 305 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 MARVELD2Q8N4S9 558 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 ZNF615Q8N8J6 731 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CDC26Q8NHZ8 85 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 C3orf30Q96M34 536 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 OR52B2Q96RD2 323 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 SPATA9Q9BWV2 254 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 ZNF703Q9H7S9 590 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 SH2D2AQ9NP31 389 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 KCNJ16Q9NPI9 418 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 GIMAP4Q9NUV9 329 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 RABL2AQ9UBK7 228 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 HEY2Q9UBP5 337 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 RNF6Q9Y252 685 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 DLGAP4Q9Y2H0 992 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CELSR1Q9NYQ6 3014 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 EML6Q6ZMW3 1958 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms