RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TRPC1P48995 793 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 MVDP53602 400 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 PNLIPRP2P54317 469 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 PSPHP78330 225 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 IGFBP7Q16270 282 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 DECR1Q16698 335 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 C6orf10Q5SRN2 563 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 TNFAIP8L2Q6P589 184 aaPredicted RBP14.69□□□□□ -0.06
USP39-205ENST00000442708 FIGNL1Q6PIW4 674 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 OLIG3Q7RTU3 272 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 CPLX4Q7Z7G2 160 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 RETREG3Q86VR2 466 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 ZFP62Q8NB50 900 aaPredicted RBP14.69□□□□□ -0.06
USP39-205ENST00000442708 PNPT1Q8TCS8 783 aaKnown RBP14.69□□□□□ -0.06
USP39-205ENST00000442708 ZFP90Q8TF47 636 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 FAR1Q8WVX9 515 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 SECISBP2Q96T21 854 aaKnown RBP14.69□□□□□ -0.06
USP39-205ENST00000442708 STACQ99469 402 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 FAM173AQ9BQD7 235 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 ANGPTL4Q9BY76 406 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 RTN4RQ9BZR6 473 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 OR51I1Q9H343 314 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 RMND5AQ9H871 391 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 GALNT9Q9HCQ5 603 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 GIN1Q9NXP7 522 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 SLC25A37Q9NYZ2 338 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 PCDHB14Q9Y5E9 798 aa14.69□□□□□ -0.06
USP39-205ENST00000442708 HELZ2Q9BYK8 2649 aaKnown RBP14.69□□□□□ -0.06
USP39-205ENST00000442708 A0A096LPI6 279 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 A0A1W2PP18 115 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 ANKRD33BA6NCL7 494 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 LRRC3CA6NJW4 275 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 C17orf51A8MQB3 221 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 FBP2O00757 339 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 ICOSLGO75144 302 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 TRIM3O75382 744 aaPredicted RBP14.68□□□□□ -0.06
USP39-205ENST00000442708 KRT20P35900 424 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 RFX3P48380 749 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 POU6F2P78424 691 aaPredicted RBP14.68□□□□□ -0.06
USP39-205ENST00000442708 FNDC7Q5VTL7 733 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 BHLHB9Q6PI77 547 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 FAM180AQ6UWF9 173 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 RNF130Q86XS8 419 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 SIAH3Q8IW03 269 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 COX18Q8N8Q8 333 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 ADAMTS15Q8TE58 950 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 RAB8BQ92930 207 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 MIB2Q96AX9 1013 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 BTBD2Q9BX70 525 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 TSPAN10Q9H1Z9 355 aaPredicted RBP14.68□□□□□ -0.06
USP39-205ENST00000442708 ARMCX1Q9P291 453 aa14.68□□□□□ -0.06
USP39-205ENST00000442708 PCNX3Q9H6A9 2034 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 TRBV5-3A0A0A0MS03 114 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 PRAMEF27A3QJZ7 478 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 FAM166BA8MTA8 275 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 B4DXG7 233 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 FADS1O60427 444 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 SHOX2O60902 331 aaPredicted RBP14.67□□□□□ -0.06
USP39-205ENST00000442708 ABCB7O75027 752 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 GLSO94925 669 aaPredicted RBP14.67□□□□□ -0.06
USP39-205ENST00000442708 UNC5CO95185 931 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 KCNH1O95259 989 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 UTS2O95399 124 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 SNRPB2P08579 225 aaKnown RBP14.67□□□□□ -0.06
USP39-205ENST00000442708 FREM3P0C091 2139 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 RFPL3SP0C7P2 107 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 OR12D1P0DN82 309 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 TDGF1P3P51864 188 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 GAS1P54826 345 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 FUT5Q11128 374 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 EFR3AQ14156 821 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.67□□□□□ -0.06
USP39-205ENST00000442708 GRAMD1BQ3KR37 738 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 DCST2Q5T1A1 773 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 LRIF1Q5T3J3 769 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 TMEM81Q6P7N7 255 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 DLEU7Q6UYE1 221 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 PIGWQ7Z7B1 504 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 TRIML2Q8N7C3 387 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 OR4C3Q8NH37 302 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 DNAJB8Q8NHS0 232 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 NR4A3Q92570 626 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 SLX1AQ9BQ83 275 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 DOHHQ9BU89 302 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 TTTY12Q9BZ98 90 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 NSRP1Q9H0G5 558 aaKnown RBP14.67□□□□□ -0.06
USP39-205ENST00000442708 METTL7AQ9H8H3 244 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 VAPAQ9P0L0 249 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 ADAM21Q9UKJ8 722 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.67□□□□□ -0.06
USP39-205ENST00000442708 FLNBO75369 2602 aaKnown RBP14.67□□□□□ -0.06
USP39-205ENST00000442708 NBASA2RRP1 2371 aa14.67□□□□□ -0.06
USP39-205ENST00000442708 SVILO95425 2214 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 PRAMEF25A6NGN4 478 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 HMGN4O00479 90 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 ANP32DO95626 131 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 KRT16P08779 473 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 KCNJ2P63252 427 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 FOXK1P85037 733 aa14.66□□□□□ -0.06
USP39-205ENST00000442708 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms