RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ANKRD28O15084 1053 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLPTM1O96005 669 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 FTH1P02794 183 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL6P05231 212 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT2B4P06133 528 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 HEXAP06865 529 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 LINC00271P0C7V0 271 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PABPC4LP0CB38 370 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 G6PDP11413 515 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PRPS2P11908 318 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CDH1P12830 882 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP1B2P14415 290 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF30P17039 623 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CKMT2P17540 419 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PSMC3P17980 439 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CYP2A7P20853 494 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 LHCGRP22888 699 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 JAK1P23458 1154 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 GSTM2P28161 218 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CCR7P32248 378 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CCR2P41597 374 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC6A12P48065 614 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SPINT3P49223 89 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 HNMTP50135 292 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 BLKP51451 505 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 RPL38P63173 70 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MYBPC1Q00872 1141 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 RHAGQ02094 409 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SEMG2Q02383 582 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PLOD1Q02809 727 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 HSPA14Q0VDF9 509 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PPIGQ13427 754 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 KCNC3Q14003 757 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NFATC4Q14934 902 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 KIAA0040Q15053 153 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SHBQ15464 509 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP6AP1Q15904 470 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NRF1Q16656 503 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CYP51A1Q16850 503 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CNPY1Q3B7I2 92 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 GGTA1PQ4G0N0 100 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP13A5Q4VNC0 1218 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 LIN52Q52LA3 116 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 RFTN2Q52LD8 501 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SGO1Q5FBB7 561 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 C6orf52Q5T4I8 152 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PLPP4Q5VZY2 271 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATG9BQ674R7 924 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 GLYATQ6IB77 296 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 IYDQ6PHW0 289 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 DLEU7Q6UYE1 221 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 RFLNAQ6ZTI6 216 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 Q6ZTK2 550 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRRC70Q7Z2Q7 622 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ADIPOR2Q86V24 386 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CHERPQ8IWX8 916 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 KIAA2013Q8IYS2 634 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM9CQ8IZT9 166 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CADM3Q8N126 398 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 LIX1Q8N485 282 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 TRAM1L1Q8N609 369 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MRPL43Q8N983 215 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 POC5Q8NA72 575 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL17RCQ8NAC3 791 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PAPD5Q8NDF8 572 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 TRPV3Q8NET8 790 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 Q8NFD4 153 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR8J3Q8NGG0 315 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR2A12Q8NGT7 310 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MCOLN3Q8TDD5 553 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 HCAR2Q8TDS4 363 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NAT14Q8WUY8 206 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NUDCD2Q8WVJ2 157 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SKA2Q8WVK7 121 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NEUROG1Q92886 237 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 BIRC7Q96CA5 298 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 DGCR14Q96DF8 476 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 TCEAL4Q96EI5 215 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CMTM7Q96FZ5 175 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CENPNQ96H22 339 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PGAM5Q96HS1 289 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC45A3Q96JT2 553 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NSMCE2Q96MF7 247 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 RAD9AQ99638 391 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 CGREF1Q99674 301 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC29A1Q99808 456 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 HAUS8Q9BT25 410 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 THUMPD3Q9BV44 507 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SPATA16Q9BXB7 569 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 TEX12Q9BXU0 123 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 UGT2B28Q9BY64 529 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MRPS26Q9BYN8 205 aaKnown RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 DPY30Q9C005 99 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ACTL8Q9H568 366 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF696Q9H7X3 374 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ACTR8Q9H981 624 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 MAP6D1Q9H9H5 199 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ERVMER34-1Q9H9K5 563 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 PARVBQ9HBI1 364 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRTM1Q9HBL6 345 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms