RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 BIVMQ86UB2 503 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 UBQLNLQ8IYU4 475 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 FAM9CQ8IZT9 166 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 MMP21Q8N119 569 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 PLD6Q8N2A8 252 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 CNEP1R1Q8N9A8 125 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 OR9A2Q8NGT5 310 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ZNF675Q8TD23 568 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ZNF483Q8TF39 744 aaPredicted RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 IFT81Q8WYA0 676 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 HGDQ93099 445 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 EXOSC8Q96B26 276 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 MTBPQ96DY7 904 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 DACH2Q96NX9 599 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 FAM111AQ96PZ2 611 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 BTBD9Q96Q07 612 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 NODALQ96S42 347 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ADOQ96SZ5 270 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 LRRC1Q9BTT6 524 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 SHCBP1LQ9BZQ2 653 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ZBTB26Q9HCK0 441 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 MIEF1Q9NQG6 463 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 FARSBQ9NSD9 589 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 ZDHHC18Q9NUE0 388 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 TAS2R9Q9NYW1 312 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 MCM8Q9UJA3 840 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 DLGAP4Q9Y2H0 992 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 WIF1Q9Y5W5 379 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 HCFC1P51610 2035 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 TLN2Q9Y4G6 2542 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 SLC22A20A6NK97 555 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 FAM171A2A8MVW0 826 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 PLOD2O00469 737 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 TO15178 435 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 SCO2O43819 266 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 URI1O94763 535 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 OR4F21O95013 312 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 ATE1O95260 518 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 ENO1P06733 434 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 SNRPAP09012 282 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 H2AFB2P0C5Z0 115 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 S1PR1P21453 382 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 NTSP30990 170 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 MPIP34949 423 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 MAGEA12P43365 314 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 KCNJ5P48544 419 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 CORO7P57737 925 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 EEFSECP57772 596 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 HMGCS1Q01581 520 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 CLCQ05315 142 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 STX5Q13190 355 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 FGFBP1Q14512 234 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 IMPG1Q17R60 797 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 TRMT12Q53H54 448 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 SPDYAQ5MJ70 313 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 OR5M10Q6IEU7 315 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 PPP4R4Q6NUP7 873 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 FAM180BQ6P0A1 224 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 RPS27LQ71UM5 84 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 P3H2Q8IVL5 708 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 SLC44A2Q8IWA5 706 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 C17orf53Q8N3J3 647 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 UHMK1Q8TAS1 419 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 METTL6Q8TCB7 284 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 SMPDL3BQ92485 455 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 KAT2AQ92830 837 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 TM4SF18Q96CE8 201 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 CNRIP1Q96F85 164 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 SLC35A4Q96G79 324 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 ZNF382Q96SR6 550 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 SLC39A3Q9BRY0 314 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 MED18Q9BUE0 208 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 STMN4Q9H169 189 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 CDC42EP4Q9H3Q1 356 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 PTGES2Q9H7Z7 377 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 SDHAF3Q9NRP4 125 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 DDX18Q9NVP1 670 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 BEX4Q9NWD9 120 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 ZNF226Q9NYT6 803 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 STOML1Q9UBI4 398 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 MRTO4Q9UKD2 239 aaKnown RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 CES1P1Q9UKY3 287 aa7.04□□□□□ -1.28
VPS50-204ENST00000438395 RPH3AQ9Y2J0 694 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 GPR55Q9Y2T6 319 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
VPS50-204ENST00000438395 HRNRQ86YZ3 2850 aaPredicted RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 A0A1W2PNV4 684 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 SEC14L5O43304 696 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 SMPD2O60906 423 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 RCBTB2O95199 551 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 HRGP04196 525 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 CRHP06850 196 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 ANXA4P09525 319 aaPredicted RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 FCGR2AP12318 317 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 PEPDP12955 493 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 ZNF708P17019 499 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 TIA1P31483 386 aaKnown RBP eCLIP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms