RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 LGSNQ5TDP6 509 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 FCRLBQ6BAA4 426 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 PLAG1Q6DJT9 500 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 GRHL2Q6ISB3 625 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 GTF2H2CQ6P1K8 395 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 MED27Q6P2C8 311 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 TRIM40Q6P9F5 258 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 ZCCHC12Q6PEW1 402 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 PAPD4Q6PIY7 484 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 QSOX2Q6ZRP7 698 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 TRMT10CQ7L0Y3 403 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 TAOK1Q7L7X3 1001 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 GSPT2Q8IYD1 628 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 LAS2Q8IYD9 372 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 IQCKQ8N0W5 287 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 RNF175Q8N4F7 328 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 CDYL2Q8N8U2 506 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 OR2L5Q8NG80 312 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 OR7G3Q8NG95 312 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 NFKBIDQ8NI38 313 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 DNAJB14Q8TBM8 379 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 PPP4R1Q8TF05 950 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 ZNF473Q8WTR7 871 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 UBE2E3Q969T4 207 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 SNRNP40Q96DI7 357 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 PHF21BQ96EK2 531 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 C19orf60Q96EN9 201 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 CNDP1Q96KN2 507 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 QRFPRQ96P65 431 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 F2RL3Q96RI0 385 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 BDH2Q9BUT1 245 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 THUMPD3Q9BV44 507 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 NPLQ9BXD5 320 aaPredicted RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 MS4A8Q9BY19 250 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 KLHL4Q9C0H6 718 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 TMPRSS5Q9H3S3 457 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 KCNK13Q9HB14 408 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 MSL2Q9HCI7 577 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 SEMA4BQ9NPR2 832 aaPredicted RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 ASF1BQ9NVP2 202 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 NDUFAF4Q9P032 175 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 CPSF2Q9P2I0 782 aaKnown RBP4.86□□□□□ -1.63
CCDC93-203ENST00000437999 XPR1Q9UBH6 696 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 VPS4AQ9UN37 437 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 ANGPTL3Q9Y5C1 460 aa4.86□□□□□ -1.63
CCDC93-203ENST00000437999 MYO18BQ8IUG5 2567 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 A0A087WWL8 130 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 IGKV3D-11A0A0A0MRZ8 115 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 A8MUA0 341 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 SAP18O00422 153 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 OR7A17O14581 309 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 WDPCPO95876 746 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 UQCRHP07919 91 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 TMIGD3P0DMS9 266 aaPredicted RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ZNF10P21506 573 aaPredicted RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ATP5A1P25705 553 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 MST1P26927 711 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 MAPK3P27361 379 aaPredicted RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 CERS1P27544 350 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 EEF1DP29692 281 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 PIK3CGP48736 1102 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 TNFSF10P50591 281 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 HNRNPFP52597 415 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 MTTPP55157 894 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 LIM2P55344 173 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 RAB38P57729 211 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 HGFACQ04756 655 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ZNF33BQ06732 778 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 SRSF1Q07955 248 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 TGM3Q08188 693 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 MRPL49Q13405 166 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 FHL3Q13643 280 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 DDX39BQ13838 428 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ZNF169Q14929 603 aaPredicted RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 EXT1Q16394 746 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 TMEM35AQ53FP2 167 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 TEX35Q5T0J7 233 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ABHD17BQ5VST6 288 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 LIPJQ5W064 366 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 H3F3CQ6NXT2 135 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 C11orf88Q6PI97 169 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ZNF793Q6ZN11 406 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 TIFABQ6ZNK6 161 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 GOLGA7Q7Z5G4 137 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 SLC15A4Q8N697 577 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 PTGR2Q8N8N7 351 aaPredicted RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 FAM47BQ8NA70 645 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 SRFBP1Q8NEF9 429 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 HUS1BQ8NHY5 278 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 M1APQ8TC57 530 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 GIMAP1Q8WWP7 306 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 HAS2Q92819 552 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 SLC7A6OSQ96CW6 309 aaPredicted RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 MTBPQ96DY7 904 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ELP4Q96EB1 424 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 CMTM7Q96FZ5 175 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 ZNF354BQ96LW1 612 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 CSF3RQ99062 836 aa4.85□□□□□ -1.63
CCDC93-203ENST00000437999 MTERF1Q99551 399 aaKnown RBP4.85□□□□□ -1.63
CCDC93-203ENST00000437999 LPAR4Q99677 370 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms