RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 RDH11Q8TC12 318 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 URGCPQ8TCY9 931 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HIST1H2ACQ93077 130 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 MRPL24Q96A35 216 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 NABP1Q96AH0 204 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 RAB39BQ96DA2 213 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 DTD2Q96FN9 168 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 CDHR1Q96JP9 859 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 CAPNS2Q96L46 248 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF560Q96MR9 790 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ANKRD27Q96NW4 1050 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 TAAR6Q96RI8 345 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 TNFRSF13CQ96RJ3 184 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 RUFY1Q96T51 708 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 C19orf43Q9BQ61 176 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 SPXQ9BT56 116 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 FUNDC2Q9BWH2 189 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 DDX47Q9H0S4 455 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 CARD9Q9H257 536 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 DPEP3Q9H4B8 488 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 GDF3Q9NR23 364 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 HOMER3Q9NSC5 361 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ANO10Q9NW15 660 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ADAM22Q9P0K1 906 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 DIMT1Q9UNQ2 313 aaKnown RBP2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 ATG4BQ9Y4P1 393 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 EYSQ5T1H1 3165 aa2.21□□□□□ -2.06
HMGB1P31-201ENST00000437242 UNC80Q8N2C7 3258 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 SCN9AQ15858 1988 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 EDC4Q6P2E9 1401 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 TRGV8A0A0C4DH27 118 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 LOC390937A0A1W2PQ73 354 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 SYCE3A1L190 88 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 MACROD2A1Z1Q3 448 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 RNF212BA8MTL3 300 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF749O43361 778 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 CSO75390 466 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 GMNNO75496 209 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 BCAS2O75934 225 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 ANXA9O76027 345 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 CXCL10P02778 98 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 IGKV3-11P04433 115 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 MBL2P11226 248 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 EZRP15311 586 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 AHCYP23526 432 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 MARCKSP29966 332 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 CHRNA3P32297 505 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 EPS15P42566 896 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 MATKP42679 507 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 RPL34P49207 117 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 GSK3BP49841 420 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 HNRNPFP52597 415 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 NDST1P52848 882 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 RPS27AP62979 156 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 GALK2Q01415 458 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 GAMTQ14353 236 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 SLC17A1Q14916 467 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 P2RY14Q15391 338 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 TRADDQ15628 312 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 WSCD2Q2TBF2 565 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 TTC31Q49AM3 519 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 GPAT3Q53EU6 434 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 VWA2Q5GFL6 755 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 RHBDD2Q6NTF9 364 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 GPR142Q7Z601 462 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 RPAINQ86UA6 219 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 SLC22A16Q86VW1 577 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 HIPK1Q86Z02 1210 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 WDR49Q8IV35 697 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 ZNF781Q8N8C0 355 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 KIAA1524Q8TCG1 905 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 FBXO25Q8TCJ0 367 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 ITLN1Q8WWA0 313 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 SLC13A3Q8WWT9 602 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 ESAMQ96AP7 390 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 RCHY1Q96PM5 261 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 FTHL17Q9BXU8 183 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 ERVK-18Q9QC07 812 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 KCNN3Q9UGI6 736 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 TUBGCP4Q9UGJ1 667 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 CCPG1Q9ULG6 757 aa2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 NIP7Q9Y221 180 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 STRAPQ9Y3F4 350 aaKnown RBP2.2□□□□□ -2.06
HMGB1P31-201ENST00000437242 PCDH11XQ9BZA7 1347 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 DUOX1Q9NRD9 1551 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 RNF103-CHMP3A0A140T963 221 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 ARHGAP42A6NI28 874 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 NEDD8-MDP1E9PL57 170 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 TXNL1O43396 289 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 BUB1O43683 1085 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 OR6B1O95007 311 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 PGK2P07205 417 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 FOSL2P15408 326 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 EPHX2P34913 555 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 SPRP35270 261 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 SLC1A4P43007 532 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 ACADSBP45954 432 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 PITPNBP48739 271 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 PEX3P56589 373 aa2.19□□□□□ -2.06
HMGB1P31-201ENST00000437242 SRP54P61011 504 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms