RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 TBC1D19Q8N5T2 526 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 C12orf76Q8N812 135 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF454Q8N9F8 522 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CHST14Q8NCH0 376 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TTLQ8NG68 377 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 OR8J2Q8NGG1 315 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 HUS1BQ8NHY5 278 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TRMT10AQ8TBZ6 339 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 WFDC5Q8TCV5 224 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SPRYD4Q8WW59 207 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ARMC5Q96C12 935 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF578Q96N58 590 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF582Q96NG8 517 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 RBP7Q96R05 134 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ATF6BQ99941 703 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 PPP1R3EQ9H7J1 279 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TEX10Q9NXF1 929 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TAS2R3Q9NYW6 316 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MED11Q9P086 117 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TNFRSF10DQ9UBN6 386 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 IL36AQ9UHA7 158 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MAFFQ9ULX9 164 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 DIMT1Q9UNQ2 313 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 EXOSC1Q9Y3B2 195 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 OR6C74A6NCV1 312 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 NPIPB15A6NHN6 443 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CPSF4LA6NMK7 179 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 HEPACAM2A8MVW5 462 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 FAAHO00519 579 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 GPR171O14626 319 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 STX11O75558 287 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CXCL10P02778 98 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 KLK1P06870 262 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 JUPP14923 745 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CBX5P45973 191 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CLCNKAP51800 687 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TAS2R41P59536 307 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 PCDH1Q08174 1060 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SWI5Q1ZZU3 235 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MPP7Q5T2T1 576 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 FAM46CQ5VWP2 391 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ACSM5Q6NUN0 579 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 HAGHLQ6PII5 290 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CRTC1Q6UUV9 634 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 LRRN1Q6UXK5 716 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 HTR3DQ70Z44 454 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 KIAA0907Q7Z7F0 614 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 PLPP6Q8IY26 295 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF433Q8N7K0 673 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 WFIKKN2Q8TEU8 576 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MARVELD3Q96A59 401 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 EXOSC8Q96B26 276 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TCEAL4Q96EI5 215 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SORCS2Q96PQ0 1159 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 YIPF4Q9BSR8 244 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 P2RY12Q9H244 342 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 EGLN3Q9H6Z9 239 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 PDFQ9HBH1 243 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZFP64Q9NPA5 681 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ACTR10Q9NZ32 417 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 AHSPQ9NZD4 102 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF175Q9Y473 711 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TRPM7Q96QT4 1865 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 UBE2QL1A1L167 161 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 BET1O15155 118 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 RPN2P04844 631 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 PRG2P13727 222 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZP3P21754 424 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SHC1P29353 583 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ACVR1BP36896 505 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MMP12P39900 470 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SNRPGP62308 76 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ILKQ13418 452 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SEC23BQ15437 767 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 TCEA2Q15560 299 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 QSOX2Q6ZRP7 698 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 NLRC3Q7RTR2 1065 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 RD3Q7Z3Z2 195 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 WDR53Q7Z5U6 358 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 LINC00518Q8N0U6 118 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 OR4C15Q8NGM1 316 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 USB1Q9BQ65 265 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 MTG2Q9H4K7 406 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF768Q9H5H4 540 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 REEP4Q9H6H4 257 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SAGE1Q9NXZ1 904 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 SLC39A1Q9NY26 324 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 NLGN3Q9NZ94 848 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 PTTG3PQ9NZH4 202 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 GLS2Q9UI32 602 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 FLVCR2Q9UPI3 526 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ASB4Q9Y574 426 aa6.98□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF98A6NK75 572 aa6.97□□□□□ -1.29
SYNPO2-203ENST00000434046 LRRN3E7EW58 273 aa6.97□□□□□ -1.29
SYNPO2-203ENST00000434046 CBX7O95931 251 aa6.97□□□□□ -1.29
SYNPO2-203ENST00000434046 IGHA2P01877 340 aa6.97□□□□□ -1.29
SYNPO2-203ENST00000434046 CBSLP0DN79 551 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms