RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CORO2BQ9UQ03 480 aa13.73□□□□□ -0.21
GARNL3-204ENST00000429629 DOCK10Q96BY6 2186 aa13.73□□□□□ -0.21
GARNL3-204ENST00000429629 CLIC1O00299 241 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 FADS1O60427 444 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 DCTN3O75935 186 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 C1QL1O75973 258 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 GSNP06396 782 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 CCL3P10147 92 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 ENDOUP21128 410 aaKnown RBP13.72□□□□□ -0.21
GARNL3-204ENST00000429629 TBXA2RP21731 343 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 PRDX6P30041 224 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 KHKP50053 298 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 C19orf57Q0VDD7 668 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 CYLC2Q14093 348 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-204ENST00000429629 UBAP2LQ14157 1087 aaKnown RBP13.72□□□□□ -0.21
GARNL3-204ENST00000429629 NNATQ16517 81 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 FAM91A1Q658Y4 838 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 ZNF324BQ6AW86 544 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-204ENST00000429629 MTERF4Q7Z6M4 381 aaKnown RBP13.72□□□□□ -0.21
GARNL3-204ENST00000429629 METTL25Q8N6Q8 603 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 PCYOX1LQ8NBM8 494 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 OR2M7Q8NG81 312 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 PIK3R3Q92569 461 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 CMTM5Q96DZ9 223 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 TMEM41AQ96HV5 264 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 SDF2Q99470 211 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 YIPF4Q9BSR8 244 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 SAP130Q9H0E3 1048 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 SERHL2Q9H4I8 314 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 KLHL1Q9NR64 748 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 UBQLN4Q9NRR5 601 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 AGPAT4Q9NRZ5 378 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 SLC6A13Q9NSD5 602 aa13.72□□□□□ -0.21
GARNL3-204ENST00000429629 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 GXYLT2A0PJZ3 443 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 TTLL8A6PVC2 850 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 HMGN4O00479 90 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 TRIM3O75382 744 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 GLSO94925 669 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 CD1EP15812 388 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 GPX2P18283 190 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 ELAVL4P26378 380 aaKnown RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 CLK3P49761 638 aaKnown RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 FOXO1Q12778 655 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 SF3A3Q12874 501 aaKnown RBP eCLIP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 INPP5JQ15735 1006 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 RUNDC3AQ59EK9 446 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 DCST2Q5T1A1 773 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 WDR53Q7Z5U6 358 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 PACS2Q86VP3 889 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 RETREG3Q86VR2 466 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 RNF130Q86XS8 419 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 PRR22Q8IZ63 422 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 FAR1Q8WVX9 515 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 JADE3Q92613 823 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 CDS1Q92903 461 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 SNRNP40Q96DI7 357 aaKnown RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 DTNBP1Q96EV8 351 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 TRNT1Q96Q11 434 aaKnown RBP13.71□□□□□ -0.21
GARNL3-204ENST00000429629 LRRC37BQ96QE4 947 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 TAAR6Q96RI8 345 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 NODALQ96S42 347 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 SH3GL1Q99961 368 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 OR51I1Q9H343 314 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 IL1RL2Q9HB29 575 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 SDHAF3Q9NRP4 125 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 DEPPQ9NTK1 212 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 SLC25A37Q9NYZ2 338 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 VAPAQ9P0L0 249 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 CNTRLQ7Z7A1 2325 aa13.71□□□□□ -0.21
GARNL3-204ENST00000429629 LOC100653049A0A140TA62 436 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 A0A1W2PQD3 144 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 PRAMEF25A6NGN4 478 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 EVPLLA8MZ36 301 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 NPIPB9F8W1W9 429 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 FBP2O00757 339 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 ICOSLGO75144 302 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 STX11O75558 287 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 KRT34O76011 436 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 UNC5CO95185 931 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 IGKV1D-16P01601 117 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 OR12D1P0DN82 309 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 CYP4B1P13584 511 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 GNA13Q14344 377 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 RGNQ15493 299 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 TRMT5Q32P41 509 aaKnown RBP13.7□□□□□ -0.22
GARNL3-204ENST00000429629 KRTCAP3Q53RY4 240 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 PRAMEF8Q5VWM4 474 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 PRAMEF7Q5VXH5 474 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 FAM180AQ6UWF9 173 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 MSRB3Q8IXL7 192 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 CLEC4FQ8N1N0 589 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
GARNL3-204ENST00000429629 GRHL3Q8TE85 626 aa13.7□□□□□ -0.22
GARNL3-204ENST00000429629 XAGE5Q8WWM1 108 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms