RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CFAP157Q5JU67 520 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 WLSQ5T9L3 541 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 FIGLAQ6QHK4 219 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ANGPTL8Q6UXH0 198 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 LRRC31Q6UY01 552 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CLEC20AQ6ZU45 233 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 RAPH1Q70E73 1250 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CFAP206Q8IYR0 622 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 FAM9CQ8IZT9 166 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CARNMT1Q8N4J0 409 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CEP112Q8N8E3 955 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC112Q8NEF3 446 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 OR6C4Q8NGE1 309 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 OR8K1Q8NGG5 319 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 MOSPD2Q8NHP6 518 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SSC4DQ8WTU2 575 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 RNF139Q8WU17 664 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 IRGQQ8WZA9 623 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 HDAC2Q92769 488 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC35B4Q969S0 331 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 AZIN2Q96A70 460 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 OMA1Q96E52 524 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SAT2Q96F10 170 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 NRBF2Q96F24 287 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 TSC22D3Q99576 134 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 BTBD10Q9BSF8 475 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 FNDC11Q9BVV2 318 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CALN1Q9BXU9 219 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 DUSP16Q9BY84 665 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 KCNK15Q9H427 330 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 PARVBQ9HBI1 364 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF701Q9NV72 531 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 EMC3Q9P0I2 261 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 AKAP7Q9P0M2 348 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF69Q9UC07 566 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 EPHA6Q9UF33 1036 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 MTRF1LQ9UGC7 380 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 STOML2Q9UJZ1 356 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ERVW-1Q9UQF0 538 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 MOB4Q9Y3A3 225 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 HBS1LQ9Y450 684 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ATP6V1DQ9Y5K8 247 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SPENQ96T58 3664 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ITIH6Q6UXX5 1313 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 SCN8AQ9UQD0 1980 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 SYNJ2BP-COX16A0A087WUM0 186 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 IQANK1A0A1B0GTG1 560 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 A0A1W2PNU3 283 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ANKRD61A6NGH8 418 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PTGES3LE9PB15 166 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 F5H0A9 414 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF195O14628 629 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ALOX15BO15296 676 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC31A1O15431 190 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 AQP9O43315 295 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 XRCC3O43542 346 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TBL1XO60907 577 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 DFFBO76075 338 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZWINTO95229 277 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC4A1P02730 911 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CSF2P04141 144 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PNMA6AP0CW24 399 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC130P13994 396 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF18P17022 549 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TNFAIP3P21580 790 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 S100A1P23297 94 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ADORA2BP29275 332 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TLX1P31314 330 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 GABRA5P31644 462 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CD70P32970 193 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 DRD3P35462 400 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CSKP41240 450 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PSMD8P48556 350 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 LMAN1P49257 510 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 NDST1P52848 882 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 YWHAGP61981 247 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 KLRB1Q12918 225 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 AIMP2Q13155 320 aaKnown RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CDH18Q13634 790 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TGIF1Q15583 401 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 WHAMMP3Q1A5X7 153 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 C15orf59Q2T9L4 293 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 POM121L1PQ3SYA9 428 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC40Q4G0X9 1142 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 C2CD6Q53TS8 623 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TCTEX1D4Q5JR98 221 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 METTL11BQ5VVY1 283 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 GUSBP11Q6P575 273 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 SCD5Q86SK9 330 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 LDB1Q86U70 411 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 NLRP14Q86W24 1093 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CBWD2Q8IUF1 395 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TMEM139Q8IV31 216 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 STK40Q8N2I9 435 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 C12orf29Q8N999 325 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 XXYLT1Q8NBI6 393 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PAPD5Q8NDF8 572 aaKnown RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 C9orf43Q8TAL5 461 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 GDAP1Q8TB36 358 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 OR8D1Q8WZ84 308 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms