RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 SPRP35270 261 aaPredicted RBP12.11□□□□□ -0.47
VEGFB-202ENST00000426086 ALDH9A1P49189 494 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 PNLIPRP2P54317 469 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 FAPQ12884 760 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 TRAF3Q13114 568 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 PGGHGQ32M88 737 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 FRG2Q64ET8 278 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
VEGFB-202ENST00000426086 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 CCDC116Q8IYX3 515 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 OR9A2Q8NGT5 310 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 OR6K3Q8NGY3 331 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 CDKL2Q92772 493 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 TRMT61AQ96FX7 289 aaKnown RBP12.11□□□□□ -0.47
VEGFB-202ENST00000426086 FRG2BQ96QU4 278 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 FOLH1BQ9HBA9 442 aa12.11□□□□□ -0.47
VEGFB-202ENST00000426086 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
VEGFB-202ENST00000426086 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.11□□□□□ -0.475e-20■■■□□ 15.7
VEGFB-202ENST00000426086 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 HMX2A2RU54 273 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 PPP6CO00743 305 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 CLOCKO15516 846 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 GMFGO60234 142 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 CD8AP01732 235 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 OPN1LWP04000 364 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 PTNP21246 168 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
VEGFB-202ENST00000426086 PSG6Q00889 435 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 ILF2Q12905 390 aaKnown RBP12.1□□□□□ -0.47
VEGFB-202ENST00000426086 EFR3AQ14156 821 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 FGFBP1Q14512 234 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 ETFDHQ16134 617 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 SGCBQ16585 318 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 NCMAPQ5T1S8 102 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 GRTP1Q5TC63 336 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 PPP4R4Q6NUP7 873 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 SEZ6L2Q6UXD5 910 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 C3orf62Q6ZUJ4 267 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 SLC44A2Q8IWA5 706 aaPredicted RBP12.1□□□□□ -0.47
VEGFB-202ENST00000426086 PPM1NQ8N819 430 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 GBP7Q8N8V2 638 aaPredicted RBP12.1□□□□□ -0.47
VEGFB-202ENST00000426086 KBTBD8Q8NFY9 601 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 RHEBL1Q8TAI7 183 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
VEGFB-202ENST00000426086 ZNF675Q8TD23 568 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 TRPC4APQ8TEL6 797 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 SMAP2Q8WU79 429 aaPredicted RBP12.1□□□□□ -0.47
VEGFB-202ENST00000426086 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 C1GALT1C1Q96EU7 318 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 GPR78Q96P69 363 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 HBEGFQ99075 208 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 PYCARDQ9ULZ3 195 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 SLC12A4Q9UP95 1085 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
VEGFB-202ENST00000426086 SYCE1LA8MT33 242 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 C2P06681 752 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 IL11P20809 199 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 ARL1P40616 181 aaPredicted RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 EIF1AXP47813 144 aaKnown RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 PRSS53Q2L4Q9 553 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 TMEM44Q2T9K0 475 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 CYS1Q717R9 158 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 PAGE2Q7Z2X7 111 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 MILR1Q7Z6M3 343 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 MARCH3Q86UD3 253 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 ZNF619Q8N2I2 560 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 OR7G2Q8NG99 324 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 DUSP19Q8WTR2 217 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 GTPBP3Q969Y2 492 aaKnown RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 S100PBPQ96BU1 408 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 ADGRG7Q96K78 797 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 NTMT1Q9BV86 223 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 C19orf24Q9BVV8 132 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 STMN4Q9H169 189 aaPredicted RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 C12orf49Q9H741 205 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 WHRNQ9P202 907 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 RNF14Q9UBS8 474 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 UTS2RQ9UKP6 389 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 EMC9Q9Y3B6 208 aa12.09□□□□□ -0.47
VEGFB-202ENST00000426086 YLPM1P49750 1951 aaKnown RBP12.09□□□□□ -0.47
VEGFB-202ENST00000426086 EIF1AYO14602 144 aaKnown RBP12.08□□□□□ -0.48
VEGFB-202ENST00000426086 GCM2O75603 506 aaPredicted RBP12.08□□□□□ -0.48
VEGFB-202ENST00000426086 PDYNP01213 254 aa12.08□□□□□ -0.48
VEGFB-202ENST00000426086 PSMB1P20618 241 aaKnown RBP12.08□□□□□ -0.48
VEGFB-202ENST00000426086 CRABP2P29373 138 aa12.08□□□□□ -0.48
VEGFB-202ENST00000426086 KRT20P35900 424 aa12.08□□□□□ -0.48
VEGFB-202ENST00000426086 CCNG1P51959 295 aa12.08□□□□□ -0.48
VEGFB-202ENST00000426086 RPS3AP61247 264 aaKnown RBP12.08□□□□□ -0.48
VEGFB-202ENST00000426086 SH2D4BQ5SQS7 431 aa12.08□□□□□ -0.48
VEGFB-202ENST00000426086 TTC19Q6DKK2 380 aaPredicted RBP12.08□□□□□ -0.48
VEGFB-202ENST00000426086 APOOLQ6UXV4 268 aa12.08□□□□□ -0.48
VEGFB-202ENST00000426086 CREG2Q8IUH2 290 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms