RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MRTO4Q9UKD2 239 aaKnown RBP16.9■□□□□ 0.3
HDAC6-205ENST00000423941 VPS4AQ9UN37 437 aa16.9■□□□□ 0.3
HDAC6-205ENST00000423941 TRIM33Q9UPN9 1127 aa16.9■□□□□ 0.3
HDAC6-205ENST00000423941 KCNE3Q9Y6H6 103 aa16.9■□□□□ 0.3
HDAC6-205ENST00000423941 POLEQ07864 2286 aa16.9■□□□□ 0.3
HDAC6-205ENST00000423941 GTF3C1Q12789 2109 aa16.9■□□□□ 0.3
HDAC6-205ENST00000423941 ESPL1Q14674 2120 aa16.9■□□□□ 0.3
HDAC6-205ENST00000423941 HELZ2Q9BYK8 2649 aaKnown RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 RNF103-CHMP3A0A140T963 221 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 KCNH1O95259 989 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 C1QCP02747 245 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 NGFRP08138 427 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 FREM3P0C091 2139 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 RFPL3SP0C7P2 107 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 MATN1P21941 496 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 IL12BP29460 328 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 KRT20P35900 424 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 RFC3P40938 356 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 PSMD4P55036 377 aaKnown RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 PPIAP62937 165 aaKnown RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 KCNJ2P63252 427 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 SPDYE7PQ495Y7 208 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 SZRD1Q7Z422 152 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 SLC22A16Q86VW1 577 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 TMEM251Q8N6I4 163 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 CHDHQ8NE62 594 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 OR52N2Q8NGI0 321 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 VPS33AQ96AX1 596 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 RMND5BQ96G75 393 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 OR7D2Q96RA2 312 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 UBQLN3Q9H347 655 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 QPCTLQ9NXS2 382 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 CCDC167Q9P0B6 97 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 BOKQ9UMX3 212 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-205ENST00000423941 GMEB1Q9Y692 573 aa16.89■□□□□ 0.29
HDAC6-205ENST00000423941 PCNX3Q9H6A9 2034 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ANKUB1A6NFN9 424 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 PRAMEF25A6NGN4 478 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 DUXAA6NLW8 204 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 RFXANKO14593 260 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 HS6ST1O60243 411 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 IGHG3P01860 377 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 GUSBP08236 651 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 MAGEA8P43361 318 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ARFIP2P53365 341 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 MVDP53602 400 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 POU6F2P78424 691 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-205ENST00000423941 MRPL49Q13405 166 aaKnown RBP16.88■□□□□ 0.29
HDAC6-205ENST00000423941 TIGD3Q6B0B8 471 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 HEPHL1Q6MZM0 1159 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ZAR1Q86SH2 424 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ADAMTS15Q8TE58 950 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ZFP90Q8TF47 636 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 TSPEARQ8WU66 669 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 C10orf82Q8WW14 230 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 CDS1Q92903 461 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 SPDL1Q96EA4 605 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 CHMP6Q96FZ7 201 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ITCHQ96J02 903 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 SLC35A5Q9BS91 424 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 PAIP1Q9H074 479 aaKnown RBP16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ZNF703Q9H7S9 590 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-205ENST00000423941 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 METTL7AQ9H8H3 244 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 FBXO34Q9NWN3 711 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 FLRT3Q9NZU0 649 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 SEC14L3Q9UDX4 400 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ABCG2Q9UNQ0 655 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 ZNF835Q9Y2P0 537 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 PCDHGB3Q9Y5G1 929 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 TENM4Q6N022 2769 aa16.88■□□□□ 0.29
HDAC6-205ENST00000423941 A0A1B0GVC2 190 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 CLEC18AA5D8T8 446 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 NPIPA5E9PKD4 350 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 PYCARD-AS1I3L0S3 204 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 NCF2P19878 526 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-205ENST00000423941 CAPN3P20807 821 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 GNLYP22749 145 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 ELAVL4P26378 380 aaKnown RBP16.87■□□□□ 0.29
HDAC6-205ENST00000423941 SOAT1P35610 550 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 UQCRFS1P47985 274 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 TXNL4AP83876 142 aaKnown RBP16.87■□□□□ 0.29
HDAC6-205ENST00000423941 TIGD2Q4W5G0 525 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 AGKQ53H12 422 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 LRIF1Q5T3J3 769 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 CLEC18BQ6UXF7 455 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 ZNF621Q6ZSS3 439 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 PACS2Q86VP3 889 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 FAM109AQ8N4B1 249 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 TRIML2Q8N7C3 387 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 COX18Q8N8Q8 333 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 WDSUB1Q8N9V3 476 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 CLEC18CQ8NCF0 446 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 OR4C3Q8NH37 302 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 FBXO30Q8TB52 745 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 OTUB1Q96FW1 271 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-205ENST00000423941 ZNF597Q96LX8 424 aa16.87■□□□□ 0.29
HDAC6-205ENST00000423941 SDF2Q99470 211 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms