RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SLC35G5Q96KT7 338 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 ZNF597Q96LX8 424 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 JSRP1Q96MG2 331 aaPredicted RBP21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 SLC35A5Q9BS91 424 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 PROK2Q9HC23 129 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 CCDC167Q9P0B6 97 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 KLHL14Q9P2G3 628 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 B4GALT7Q9UBV7 327 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 MYO18BQ8IUG5 2567 aa21.17■□□□□ 0.98
SMARCB1-205ENST00000417137 ASNA1O43681 348 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 ICOSLGO75144 302 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 GLSO94925 669 aaPredicted RBP21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 ANP32DO95626 131 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 AGR2O95994 175 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 CYP4B1P13584 511 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 TRPC1P48995 793 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 TDGF1P3P51864 188 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 RNFT1Q5M7Z0 435 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 GFRALQ6UXV0 394 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 SIAH3Q8IW03 269 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 VPS33AQ96AX1 596 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 TMEM41AQ96HV5 264 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 GPR137Q96N19 417 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 INPP5KQ9BT40 448 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 OSBPL11Q9BXB4 747 aa21.16■□□□□ 0.98
SMARCB1-205ENST00000417137 TRIM3O75382 744 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 KCNK2O95069 426 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 ANXA11P50995 505 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 TXNL4AP83876 142 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 RBPJQ06330 500 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 RCAN2Q14206 197 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 SAXO2Q658L1 398 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 BICRALQ6AI39 1079 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 DESI1Q6ICB0 168 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 FUNDC1Q8IVP5 155 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 CLEC4FQ8N1N0 589 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 FAM109AQ8N4B1 249 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 FAM110BQ8TC76 370 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 MIPOL1Q8TD10 442 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 CDS1Q92903 461 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 SPDL1Q96EA4 605 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 NEURL3Q96EH8 262 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 OR7D2Q96RA2 312 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 TSPAN10Q9H1Z9 355 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 SDHAF3Q9NRP4 125 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 ABCG2Q9UNQ0 655 aa21.15■□□□□ 0.98
SMARCB1-205ENST00000417137 FAM166BA8MTA8 275 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 NR5A2O00482 541 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 UNC5CO95185 931 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 KRT75O95678 551 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 ZCCHC18P0CG32 403 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 ATP6V1C1P21283 382 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 GNLYP22749 145 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 ELAVL4P26378 380 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 MAN2A2P49641 1150 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 C6orf10Q5SRN2 563 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 CGB2Q6NT52 195 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 GHDCQ8N2G8 530 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 OR1J4Q8NGS1 313 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 DTNBP1Q96EV8 351 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 OTUB1Q96FW1 271 aaPredicted RBP21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 HHATLQ9HCP6 504 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 SERHLQ9NQF3 203 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 EXD2Q9NVH0 621 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 QPCTLQ9NXS2 382 aa21.14■□□□□ 0.97
SMARCB1-205ENST00000417137 PYCARD-AS1I3L0S3 204 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 UTS2O95399 124 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 AK1P00568 194 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 GSNP06396 782 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 EVI2BP34910 448 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 CDKN2CP42773 168 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 MRPL49Q13405 166 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 SLC10A1Q14973 349 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 ATAD3BQ5T9A4 648 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 TIGD3Q6B0B8 471 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 FIGNL1Q6PIW4 674 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 ANGPTL8Q6UXH0 198 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 TMEM251Q8N6I4 163 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 NTNG2Q96CW9 530 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 PHF12Q96QT6 1004 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 NSRP1Q9H0G5 558 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 ZNF385DQ9H6B1 395 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 ZDHHC11Q9H8X9 412 aa21.13■□□□□ 0.97
SMARCB1-205ENST00000417137 IGKV1D-16P01601 117 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 HPGDP15428 266 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 PTGDSP41222 190 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 MAGEA8P43361 318 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 KHKP50053 298 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 RPS26P62854 115 aaKnown RBP21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 SF3A3Q12874 501 aaKnown RBP eCLIP21.12■□□□□ 0.975e-7■■■□□ 18.6
SMARCB1-205ENST00000417137 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 CMPK2Q5EBM0 449 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 DCST2Q5T1A1 773 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 OR52N2Q8NGI0 321 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 OR5D16Q8NGK9 328 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 TSPEARQ8WU66 669 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 GTF2H4Q92759 462 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 TBL1XR1Q9BZK7 514 aa21.12■□□□□ 0.97
SMARCB1-205ENST00000417137 HOXD1Q9GZZ0 328 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms