RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CPXM2Q8N436 756 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CPEB1Q9BZB8 566 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 NMNAT1Q9HAN9 279 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 TRBV2A0A0J9YWF9 115 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 NPIPB15A6NHN6 443 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 RTCAO00442 366 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC16A8O95907 504 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 ALDOBP05062 364 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 ERCC1P07992 297 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 PTNP21246 168 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CBLP22681 906 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 PYCR1P32322 319 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 CASP3P42574 277 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 HERV-K104P61576 105 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 BORAQ6PGQ7 559 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 DPPA4Q7L190 304 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 NAGSQ8N159 534 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 SCGB1C1Q8TD33 95 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 ZDHHC1Q8WTX9 485 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC41A3Q96GZ6 507 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 HOXD1Q9GZZ0 328 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 USP3Q9Y6I4 520 aa13.02□□□□□ -0.33
SMARCA4-202ENST00000413806 SORBS2O94875 1100 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SOX9P48436 509 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 GTDC1Q4AE62 458 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 C3P1Q6ZMU1 363 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF283Q8N7M2 679 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 CHST14Q8NCH0 376 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 BMFQ96LC9 184 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 KCNK12Q9HB15 430 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 MYH10P35580 1976 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 PEX12O00623 359 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 UCHL1P09936 223 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 PRKCAP17252 672 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 CA5AP35218 305 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 GPR4P46093 362 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 DMRT3Q9NQL9 472 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 ADH7P40394 386 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 DBPQ10586 325 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 CCINQ13939 588 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SSX9Q7RTT3 188 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 LNX2Q8N448 690 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 MAL2Q969L2 176 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 FAM46AQ96IP4 442 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC29A1Q99808 456 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC6A7Q99884 636 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 IL21RQ9HBE5 538 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 ASB4Q9Y574 426 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 DNMT3AQ9Y6K1 912 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 AHDC1Q5TGY3 1603 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 FMO6PO60774 539 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SDC1P18827 310 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 DDCP20711 480 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 ADRA1AP35348 466 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 TTC9BQ8N6N2 239 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SORCS1Q8WY21 1168 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 MS4A4EQ96PG1 132 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 SERINC2Q96SA4 455 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 PINK1Q9BXM7 581 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 ATG5Q9H1Y0 275 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 TEX10Q9NXF1 929 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 NUBP2Q9Y5Y2 271 aa13.01□□□□□ -0.33
SMARCA4-202ENST00000413806 H7C417 338 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 UBFD1O14562 309 aaKnown RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC34A2O95436 690 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 CD34P28906 385 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 ALG10Q5BKT4 473 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 TMEM25Q86YD3 366 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 OR7G3Q8NG95 312 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 PDLIM5Q96HC4 596 aaKnown RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 ZBTB20Q9HC78 741 aaPredicted RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 PCYT1BQ9Y5K3 369 aaPredicted RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 GPR89AB7ZAQ6 455 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 C11orf98E9PRG8 122 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 CASC3O15234 703 aaKnown RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 SC5DO75845 299 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 GPR89BP0CG08 455 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 CSF2RAP15509 400 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 RUNX3Q13761 415 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 GNMTQ14749 295 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 CLVS2Q5SYC1 327 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 SLC22A10Q63ZE4 541 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF425Q6IV72 752 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF300Q96RE9 604 aaPredicted RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 SULT4A1Q9BR01 284 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 GPN2Q9H9Y4 310 aaPredicted RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 RNF186Q9NXI6 227 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 INTS6Q9UL03 887 aaKnown RBP13□□□□□ -0.33
SMARCA4-202ENST00000413806 A0A1B0GV50 99 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 EEF1E1-BLOC1S5C9J1V9 151 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 F5H5P2 479 aa13□□□□□ -0.33
SMARCA4-202ENST00000413806 ZNF84P51523 738 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms