RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PAHP00439 452 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 HMGN1P05114 100 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 GNSP15586 552 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 CD53P19397 219 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 AHCYP23526 432 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 GPR1P46091 355 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 TAS2R38P59533 333 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 TLE2Q04725 743 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 FZD5Q13467 585 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 INSL4Q14641 139 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 DECR1Q16698 335 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 HSD17B12Q53GQ0 312 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 ARHGAP15Q53QZ3 475 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 CLEC12AQ5QGZ9 265 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 CD276Q5ZPR3 534 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 KIAA1161Q6NSJ0 714 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 SMARCD3Q6STE5 483 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 TEX261Q6UWH6 196 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 OAFQ86UD1 273 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 KLBQ86Z14 1044 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 MOAP1Q96BY2 351 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 SCLYQ96I15 445 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 MAP6Q96JE9 813 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 ABCG5Q9H222 651 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 OSGEPL1Q9H4B0 414 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 CUEDC1Q9NWM3 386 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-202ENST00000413219 SLC13A4Q9UKG4 626 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 CACNG2Q9Y698 323 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 DNMT3AQ9Y6K1 912 aaPredicted RBP16.52■□□□□ 0.24
SDCBP-202ENST00000413219 U3KQ87 197 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 KIAA0355O15063 1070 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 TPOP07202 933 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 ACSL1P33121 698 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 PITPNBP48739 271 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 NCBP2P52298 156 aaKnown RBP eCLIP16.52■□□□□ 0.23
SDCBP-202ENST00000413219 ARFIP1P53367 373 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.23
SDCBP-202ENST00000413219 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 POM121L1PQ3SYA9 428 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 TOR2AQ5JU69 321 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 ZNF697Q5TEC3 545 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 OR4C11Q6IEV9 310 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 SLC30A6Q6NXT4 461 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 ACOT11Q8WXI4 607 aaPredicted RBP16.52■□□□□ 0.23
SDCBP-202ENST00000413219 PHF21AQ96BD5 680 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 NUS1Q96E22 293 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 DPH7Q9BTV6 452 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 FAIM2Q9BWQ8 316 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 MTG2Q9H4K7 406 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 ZFP64Q9NPA5 681 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 ENAMQ9NRM1 1142 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 SEMA4GQ9NTN9 838 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 H2AFY2Q9P0M6 372 aaPredicted RBP16.52■□□□□ 0.23
SDCBP-202ENST00000413219 NUP50Q9UKX7 468 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 NUBP2Q9Y5Y2 271 aa16.52■□□□□ 0.23
SDCBP-202ENST00000413219 KIAA1549LQ6ZVL6 1849 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 COL4A3Q01955 1670 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 K7ESM1 405 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 KLF4O43474 513 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 LANCL1O43813 399 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 LZTS3O60299 673 aaPredicted RBP16.51■□□□□ 0.23
SDCBP-202ENST00000413219 ANXA3P12429 323 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 IFI30P13284 250 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 NPR2P20594 1047 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 BTCP35070 178 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 ATP6V1E1P36543 226 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 COL28A1Q2UY09 1125 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 ZNF311Q5JNZ3 666 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 BCL2L15Q5TBC7 163 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 NDUFAF5Q5TEU4 345 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 FAM46CQ5VWP2 391 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 NR2C2APQ86WQ0 139 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 GID4Q8IVV7 300 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 OR56A1Q8NGH5 318 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 SORCS1Q8WY21 1168 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 OR2M2Q96R28 347 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 BBS4Q96RK4 519 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 DPAGT1Q9H3H5 408 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 GLTPQ9NZD2 209 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 MGAT4AQ9UM21 535 aa16.51■□□□□ 0.23
SDCBP-202ENST00000413219 ZFR2Q9UPR6 939 aaKnown RBP16.51■□□□□ 0.23
SDCBP-202ENST00000413219 SPINT1O43278 529 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 TGM5O43548 720 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 RAF1P04049 648 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 F8A1P23610 371 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 MLLT1Q03111 559 aaPredicted RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 DPTQ07507 201 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 NTRK2Q16620 822 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 SDE2Q6IQ49 451 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 PYHIN1Q6K0P9 492 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 CDC73Q6P1J9 531 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 ZNF620Q6ZNG0 422 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 GET4Q7L5D6 327 aaPredicted RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 C11orf96Q7Z7L8 435 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 TPRA1Q86W33 373 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 SLC38A6Q8IZM9 456 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 ZNF680Q8NEM1 530 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 TFGQ92734 400 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms