RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CDC73Q6P1J9 531 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 GHDCQ8N2G8 530 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 FAM109AQ8N4B1 249 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 COX18Q8N8Q8 333 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 OR52N2Q8NGI0 321 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 TMEM41AQ96HV5 264 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 ZNF597Q96LX8 424 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 JSRP1Q96MG2 331 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 PANX1Q96RD7 426 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 OSBPL11Q9BXB4 747 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 PIGUQ9H490 435 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 KLRF1Q9NZS2 232 aa18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 USP9XQ93008 2570 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-207ENST00000409417 BAHCC1Q9P281 2608 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 KCNK2O95069 426 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 IGKV1D-16P01601 117 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 TROVE2P10155 538 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 CYP4B1P13584 511 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 PTGDSP41222 190 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 MAGEA5P43359 124 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 MASP1P48740 699 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 FNDC7Q5VTL7 733 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 MSANTD1Q6ZTZ1 278 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 CLEC4FQ8N1N0 589 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 PRR7Q8TB68 274 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 FAM110BQ8TC76 370 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 ADAMTS15Q8TE58 950 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 RNF138Q8WVD3 245 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 CHMP6Q96FZ7 201 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 BTBD2Q9BX70 525 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 ZNF703Q9H7S9 590 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 GALNT9Q9HCQ5 603 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 SERHLQ9NQF3 203 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 B4GALT7Q9UBV7 327 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 TRIM33Q9UPN9 1127 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 PCDHGB3Q9Y5G1 929 aa18.16■□□□□ 0.5
PDLIM2-207ENST00000409417 CCDC154A6NI56 674 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 RFPL3SP0C7P2 107 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 ELAVL4P26378 380 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 RFX3P48380 749 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 ATP4BP51164 291 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 RBPJQ06330 500 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 RCAN2Q14206 197 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 TIGD2Q4W5G0 525 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 TIGD3Q6B0B8 471 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 TRIML2Q8N7C3 387 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 NEURL3Q96EH8 262 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 OTUB1Q96FW1 271 aaPredicted RBP18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 INPP5KQ9BT40 448 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 DEFB127Q9H1M4 99 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 RMND5AQ9H871 391 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 PLSCR2Q9NRY7 297 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 QPCTLQ9NXS2 382 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 ABCG2Q9UNQ0 655 aa18.15■□□□□ 0.5
PDLIM2-207ENST00000409417 ZNF407Q9C0G0 2248 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 RFXANKO14593 260 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 MATN1P21941 496 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 LCN1P31025 176 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 EVI2BP34910 448 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 RPS26P62854 115 aaKnown RBP18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 POU6F2P78424 691 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 SQLEQ14534 574 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 SLC10A1Q14973 349 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 METTL21CQ5VZV1 264 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 SAXO2Q658L1 398 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 BLOC1S3Q6QNY0 202 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 MIPOL1Q8TD10 442 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 CDS1Q92903 461 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 VPS33AQ96AX1 596 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 GNRHR2Q96P88 292 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 ZNF317Q96PQ6 595 aaPredicted RBP18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 SLC35A5Q9BS91 424 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 G6PC3Q9BUM1 346 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 RABEP2Q9H5N1 569 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 OSGIN2Q9Y236 505 aa18.14■□□□□ 0.5
PDLIM2-207ENST00000409417 DUXAA6NLW8 204 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 FADS1O60427 444 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 PDE9AO76083 593 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 UTS2O95399 124 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 IGHG3P01860 377 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 STSP08842 583 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 NCF2P19878 526 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 CHI3L1P36222 383 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 FIGNL1Q6PIW4 674 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 ANGPTL8Q6UXH0 198 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 ZNF621Q6ZSS3 439 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 FUNDC1Q8IVP5 155 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 CHERPQ8IWX8 916 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 OR1J4Q8NGS1 313 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 ITCHQ96J02 903 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 SLC35G5Q96KT7 338 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 OR7D2Q96RA2 312 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 TMEM120AQ9BXJ8 343 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 UBQLN3Q9H347 655 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 SERHL2Q9H4I8 314 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 FLRT3Q9NZU0 649 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 C15orf41Q9Y2V0 281 aa18.14■□□□□ 0.49
PDLIM2-207ENST00000409417 WIF1Q9Y5W5 379 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms