RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 FAM198BQ6UWH4 519 aa11.44□□□□□ -0.58
SMCR8-201ENST00000406438 USP53Q70EK8 1073 aa11.44□□□□□ -0.58
SMCR8-201ENST00000406438 ZNF395Q9H8N7 513 aaPredicted RBP11.44□□□□□ -0.58
SMCR8-201ENST00000406438 C17orf113A0A1B0GUU1 675 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 LOC102725191A0A1B0GVB3 256 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 PIRO00625 290 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 LCATP04180 440 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CRABP1P29762 137 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ARL6IP1Q15041 203 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 PDZD9Q8IXQ8 264 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MARVELD2Q8N4S9 558 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 DTX3Q8N9I9 347 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 C16orf78Q8WTQ4 265 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 SLC45A3Q96JT2 553 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 LPAR4Q99677 370 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MGLLQ99685 303 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ZNF160Q9HCG1 818 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 HEATR1Q9H583 2144 aaKnown RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 BRWD1Q9NSI6 2320 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 AMY2AP04746 511 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 DDCP20711 480 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 FOLR3P41439 243 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 SHC2P98077 582 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 PLBD1Q6P4A8 553 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ECHDC3Q96DC8 303 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 LGALS12Q96DT0 336 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 F2RL3Q96RI0 385 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CLN5O75503 358 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MSR1P21757 451 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CDKN2CP42773 168 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 RUNX2Q13950 521 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ZNF529Q6P280 563 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 HMGN2P46Q86SG4 172 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 RAB39BQ96DA2 213 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 SLC17A9Q9BYT1 436 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ABCG5Q9H222 651 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 HSPE1-MOB4S4R3N1 261 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ADAP00813 363 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CLCN2P51788 898 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 TGFBR3Q03167 851 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 HAVCR2Q8TDQ0 301 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ZNF681Q96N22 645 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ARHGAP39Q9C0H5 1083 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 APMAPQ9HDC9 416 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CCM2LQ9NUG4 571 aaPredicted RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 C14orf119Q9NWQ9 140 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 HIF1ANQ9NWT6 349 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MRPL15Q9P015 296 aaKnown RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 GPR160Q9UJ42 338 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 C5P01031 1676 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MEGF11A6BM72 1044 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 FAM155AB1AL88 458 aaPredicted RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 RBPJQ06330 500 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CPNE8Q86YQ8 564 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MS4A15Q8N5U1 240 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 OR5D14Q8NGL3 314 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 RSC1A1Q92681 617 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 TBC1D20Q96BZ9 403 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MRI1Q9BV20 369 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 TSPAN10Q9H1Z9 355 aaPredicted RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 OR10A5Q9H207 317 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 OR10A2Q9H208 303 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 POLR1CO15160 346 aaPredicted RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CDK3Q00526 305 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 C6orf141Q5SZD1 244 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 SYT14Q8NB59 555 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 OR10T2Q8NGX3 314 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 SCAMP4Q969E2 229 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 CHFRQ96EP1 664 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 LMF1Q96S06 567 aa11.43□□□□□ -0.58
SMCR8-201ENST00000406438 MCTS1Q9ULC4 181 aaKnown RBP11.43□□□□□ -0.58
SMCR8-201ENST00000406438 A6NIZ1 184 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 CD63P08962 238 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 FOSL1P15407 271 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 PITPNBP48739 271 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 RAP1BP61224 184 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 RAP1AP62834 184 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 ZNF704Q6ZNC4 412 aaPredicted RBP11.42□□□□□ -0.58
SMCR8-201ENST00000406438 OR52N2Q8NGI0 321 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 SLC2A12Q8TD20 617 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 ZNF578Q96N58 590 aaPredicted RBP11.42□□□□□ -0.58
SMCR8-201ENST00000406438 OR14A2Q96R54 314 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 F5H5K5 113 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 PAHP00439 452 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 MAOAP21397 527 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 EPHA4P54764 986 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 SCML4Q8N228 414 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 NSUN5Q96P11 429 aaKnown RBP11.42□□□□□ -0.58
SMCR8-201ENST00000406438 ACOT13Q9NPJ3 140 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 GJB5O95377 273 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 EPHA1P21709 976 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 DIO3P55073 304 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 CLDN8P56748 225 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 TSPYL5Q86VY4 417 aaPredicted RBP11.42□□□□□ -0.58
SMCR8-201ENST00000406438 OR9A2Q8NGT5 310 aa11.42□□□□□ -0.58
SMCR8-201ENST00000406438 CIDECQ96AQ7 238 aaPredicted RBP11.42□□□□□ -0.58
SMCR8-201ENST00000406438 SERINC2Q96SA4 455 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms