RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MEIOCA2RUB1 952 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 MYL12BO14950 172 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 NFATC1O95644 943 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 ALPPP05187 535 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 IL9P15248 144 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 GJA4P35212 333 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 MTNR1AP48039 350 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 RACK1P63244 317 aaKnown RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 ACSM1Q08AH1 577 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 ARHGEF6Q15052 776 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 TYW3Q6IPR3 259 aaKnown RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 SLC30A6Q6NXT4 461 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 ZNF517Q6ZMY9 492 aaPredicted RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 GDF7Q7Z4P5 450 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 NLGN4YQ8NFZ3 816 aaPredicted RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 ACSL5Q9ULC5 683 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SSR3Q9UNL2 185 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 GRIP1Q9Y3R0 1128 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 FAM170BA6NMN3 283 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 CCNKO75909 580 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 PAK4O96013 591 aaPredicted RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 NAT2P11245 290 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 PTNP21246 168 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 HTR2AP28223 471 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SMIM11AP58511 58 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 EEF1A1P68104 462 aaKnown RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 UBE3AQ05086 875 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.2□□□□□ -0.94
MSH2-202ENST00000406134 MADCAM1Q13477 382 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 TAB1Q15750 504 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 CST6Q15828 149 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SNAPC1Q16533 368 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 CLEC12AQ5QGZ9 265 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 FHL5Q5TD97 284 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SLC27A4Q6P1M0 643 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 XKRXQ6PP77 449 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 ZNF620Q6ZNG0 422 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SZRD1Q7Z422 152 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 KCT2Q8NC54 265 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 KAT2AQ92830 837 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SMARCD2Q92925 531 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 KCNJ15Q99712 375 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 HCAR1Q9BXC0 346 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 SLC6A17Q9H1V8 727 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 WDR26Q9H7D7 661 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 ISG20L2Q9H9L3 353 aaKnown RBP9.2□□□□□ -0.94
MSH2-202ENST00000406134 TRPV4Q9HBA0 871 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 IL20RAQ9UHF4 553 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 TMEM131Q92545 1883 aa9.2□□□□□ -0.94
MSH2-202ENST00000406134 A0A1W2PP55 124 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 ZC3H12DA2A288 527 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 FAM47E-STBD1D6RA91 191 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SCAMP1O15126 338 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 RGS5O15539 181 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 P2RX6O15547 441 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 ERAL1O75616 437 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 RPN2P04844 631 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SERPIND1P05546 499 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SMIM10L1P0DMW3 83 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 RPS4Y1P22090 263 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 GPR4P46093 362 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SLC9A3P48764 834 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SLC9A5Q14940 896 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 PAQR7Q86WK9 346 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 MFSD9Q8NBP5 474 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SLC16A11Q8NCK7 471 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 NUP43Q8NFH3 380 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 GNPDA2Q8TDQ7 276 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 BADQ92934 168 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SMIM10Q96HG1 83 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 TIMM29Q9BSF4 260 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 NDEL1Q9GZM8 345 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 IMP3Q9NV31 184 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 NOX1Q9Y5S8 564 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 GPR89AB7ZAQ6 455 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SOCS6O14544 535 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 GPR89BP0CG08 455 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 FPR3P25089 353 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 APEX1P27695 318 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 AHRP35869 848 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 WASP42768 502 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 RAB8AP61006 207 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 FHL1Q13642 323 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 RPE65Q16518 533 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 MAPK14Q16539 360 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 ZNF311Q5JNZ3 666 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 ZNF836Q6ZNA1 936 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 LHFPL3Q86UP9 236 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 LINC00471Q8N535 108 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 SMG7Q92540 1137 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 FYTTD1Q96QD9 318 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 MRPS30Q9NP92 439 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 FBXO9Q9UK97 447 aaPredicted RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 SLC9A8Q9Y2E8 581 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 KIAA0100Q14667 2235 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 TRDV1A0A1B0GX56 115 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 C1QTNF3-AMACRE9PGA6 284 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 CH25HO95992 272 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms