RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SLC2A7Q6PXP3 512 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 DNAJC14Q6Y2X3 702 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 SPNS3Q6ZMD2 512 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 CYP4Z2PQ8N1L4 340 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 COX18Q8N8Q8 333 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 ZNF441Q8N8Z8 693 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 SIMC1Q8NDZ2 872 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 RP9Q8TA86 221 aaKnown RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 NEURL3Q96EH8 262 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 SLC35G5Q96KT7 338 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 STACQ99469 402 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 INPP5KQ9BT40 448 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 LMF2Q9BU23 707 aaKnown RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 NXF5Q9H1B4 397 aaKnown RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 LIN28AQ9H9Z2 209 aaKnown RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 DUSP22Q9NRW4 184 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 EXD2Q9NVH0 621 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 GID8Q9NWU2 228 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 THUMPD1Q9NXG2 353 aaKnown RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 GIN1Q9NXP7 522 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 LRFN1Q9P244 771 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.72□□□□□ -0.85
RPAIN-204ENST00000405578 CORO2BQ9UQ03 480 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 NPFFR2Q9Y5X5 522 aa9.72□□□□□ -0.85
RPAIN-204ENST00000405578 DNHD1Q96M86 4753 aa9.71□□□□□ -0.85
RPAIN-204ENST00000405578 LOC100653049A0A140TA62 436 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 TMEM200CA6NKL6 621 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 EVPLLA8MZ36 301 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 REM1O75628 298 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 KRT34O76011 436 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 AK1P00568 194 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 NPPAP01160 153 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CT45A8P0DMV1 189 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CT45A9P0DMV2 189 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 MATN1P21941 496 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 ABCD3P28288 659 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SOX18P35713 384 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CD96P40200 585 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SOX3P41225 446 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 ZFP36L2P47974 494 aaKnown RBP9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CORO7P57737 925 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 DUSP8Q13202 625 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 ART3Q13508 389 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 NFYCQ13952 458 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 EFR3AQ14156 821 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 OR1C1Q15619 314 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CT45A2Q5DJT8 189 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SAXO2Q658L1 398 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CDC73Q6P1J9 531 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 IL20RBQ6UXL0 311 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 C16orf47Q6ZP98 133 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-204ENST00000405578 RTL4Q6ZR62 310 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SNX32Q86XE0 403 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 DPP10Q8N608 796 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 AMER2Q8N7J2 671 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 TMEM178AQ8NBL3 297 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 FAM13CQ8NE31 585 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 TMCO6Q96DC7 493 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SPACA9Q96E40 222 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-204ENST00000405578 C16orf58Q96GQ5 468 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 NPAS2Q99743 824 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SH3GL1Q99961 368 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 YIPF4Q9BSR8 244 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 G6PC3Q9BUM1 346 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 PIGUQ9H490 435 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 TRIM45Q9H8W5 580 aaPredicted RBP9.71□□□□□ -0.86
RPAIN-204ENST00000405578 TPT1P8Q9HAU6 139 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 SERHLQ9NQF3 203 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 GPATCH2Q9NW75 528 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 ANKRD10Q9NXR5 420 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 PLA2G3Q9NZ20 509 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 CBLCQ9ULV8 474 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 DTX4Q9Y2E6 619 aa9.71□□□□□ -0.86
RPAIN-204ENST00000405578 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 A0A1B0GUH1 482 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 OR6C70A6NIJ9 312 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CLIC1O00299 241 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 MRASO14807 208 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 ASNA1O43681 348 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 MAN1A2O60476 641 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PPM1BO75688 479 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 SLC25A12O75746 678 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 OR6B1O95007 311 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 NKX2-2O95096 273 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 F10P00742 488 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 P04436 131 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 COX4I1P13073 169 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 COX6B1P14854 86 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 ATP6V1C1P21283 382 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PRDX6P30041 224 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 PIGAP37287 484 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CDKN2CP42773 168 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CRATP43155 626 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 RFX3P48380 749 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 CLK3P49761 638 aaKnown RBP9.7□□□□□ -0.86
RPAIN-204ENST00000405578 TNFSF10P50591 281 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 MNAT1P51948 309 aa9.7□□□□□ -0.86
RPAIN-204ENST00000405578 POU6F2P78424 691 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms