RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF385CQ66K41 422 aaPredicted RBP19.51■□□□□ 0.71
TPM1-208ENST00000404484 IGF2-ASQ6U949 168 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 DAZLQ92904 295 aaKnown RBP19.51■□□□□ 0.71
TPM1-208ENST00000404484 FGF11Q92914 225 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 NRBF2Q96F24 287 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 VSTM2LQ96N03 204 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 LRFN5Q96NI6 719 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 ZNF300Q96RE9 604 aaPredicted RBP19.51■□□□□ 0.71
TPM1-208ENST00000404484 SLC29A1Q99808 456 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 OR10A5Q9H207 317 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 NDUFAF4Q9P032 175 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 SLC13A4Q9UKG4 626 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 SLC9A8Q9Y2E8 581 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 SH3GLB1Q9Y371 365 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 LOXL2Q9Y4K0 774 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 ENPP4Q9Y6X5 453 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 PDLIM1O00151 329 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 SYT5O00445 386 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 HPRP00739 348 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 UQCRBP14927 111 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 RBMS1P29558 406 aaKnown RBP19.5■□□□□ 0.71
TPM1-208ENST00000404484 DNAJA1P31689 397 aaKnown RBP19.5■□□□□ 0.71
TPM1-208ENST00000404484 DUSP8Q13202 625 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 GK3PQ14409 553 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 IQCCQ4KMZ1 466 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 SHQ1Q6PI26 577 aaKnown RBP19.5■□□□□ 0.71
TPM1-208ENST00000404484 STK32CQ86UX6 486 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 PEX5LQ8IYB4 626 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 GPR32P1Q8NGA4 272 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 PTPMT1Q8WUK0 201 aaPredicted RBP19.5■□□□□ 0.71
TPM1-208ENST00000404484 SDF2Q99470 211 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 CTRCQ99895 268 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 OSBPL11Q9BXB4 747 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 ZNF350Q9GZX5 532 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 SLC26A1Q9H2B4 701 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 SLC39A1Q9NY26 324 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 FER1L5A0AVI2 2057 aa19.5■□□□□ 0.71
TPM1-208ENST00000404484 MEN1O00255 615 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 EI24O14681 340 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 NME6O75414 186 aaPredicted RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 DNAJB5O75953 348 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 RECKO95980 971 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 KLK3P07288 261 aaPredicted RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 PABPC4LP0CB38 370 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 RHCEP18577 417 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 ITIH1P19827 911 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 FPR1P21462 350 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 TRHRP34981 398 aaPredicted RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 DCTP40126 519 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 FRRS1Q6ZNA5 592 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 CYP4Z1Q86W10 505 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 ZNF619Q8N2I2 560 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 ZNF615Q8N8J6 731 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 APOBEC4Q8WW27 367 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 SENP5Q96HI0 755 aaPredicted RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 EPYCQ99645 322 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 RBM4BQ9BQ04 359 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 RBM4Q9BWF3 364 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 Q9N2J8 555 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 NXT1Q9UKK6 140 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 ZNF232Q9UNY5 417 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 SAMHD1Q9Y3Z3 626 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 KMT2BQ9UMN6 2715 aaPredicted RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 CFAP47Q6ZTR5 3102 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 CDRT15L2A8MXV6 281 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 HEXBP07686 556 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 CCL4P13236 92 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 PRKAR1BP31321 381 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 OR1E2P47887 323 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 ALDH3A2P51648 485 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 DAG1Q14118 895 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 LARS2Q15031 903 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 ZNF311Q5JNZ3 666 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 TYW3Q6IPR3 259 aaKnown RBP19.49■□□□□ 0.71
TPM1-208ENST00000404484 DHRS4L2Q6PKH6 230 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 CARM1Q86X55 608 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 PRSS58Q8IYP2 241 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 C16orf52Q8NHV5 167 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 ZPBPQ9BS86 351 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 SAP130Q9H0E3 1048 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 KLHL28Q9NXS3 571 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 PISDQ9UG56 409 aa19.49■□□□□ 0.71
TPM1-208ENST00000404484 VSTM2BA6NLU5 285 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 HRKO00198 91 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 THBS1P07996 1170 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 JMJD7P0C870 316 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 TNFRSF1BP20333 461 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 ETV5P41161 510 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 PSG6Q00889 435 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 EIPR1Q53HC9 387 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 OTUD3Q5T2D3 398 aaPredicted RBP19.48■□□□□ 0.71
TPM1-208ENST00000404484 AP1ARQ63HQ0 302 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 OR52P1PQ8NH57 321 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 METTL21AQ8WXB1 218 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 PIK3R3Q92569 461 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 RDH12Q96NR8 316 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 PIP5K1AQ99755 562 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 AMBRA1Q9C0C7 1298 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 GABARAPL1Q9H0R8 117 aa19.48■□□□□ 0.71
TPM1-208ENST00000404484 WDR54Q9H977 334 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms