RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 CDC73Q6P1J9 531 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SZRD1Q7Z422 152 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SLC16A11Q8NCK7 471 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 FAM110BQ8TC76 370 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SARAFQ96BY9 339 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 JSRP1Q96MG2 331 aaPredicted RBP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SIKE1Q9BRV8 207 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 G6PC3Q9BUM1 346 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 PIGUQ9H490 435 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 LDAHQ9H6V9 325 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 CXorf36Q9H7Y0 433 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 EQTNQ9NQ60 294 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 SDR39U1Q9NRG7 319 aaPredicted RBP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 ZNF446Q9NWS9 450 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 ZIM2Q9NZV7 527 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 BTNL2Q9UIR0 455 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 C15orf41Q9Y2V0 281 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 MRPS18CQ9Y3D5 142 aaKnown RBP13.06□□□□□ -0.32
HDDC2-202ENST00000398153 WIF1Q9Y5W5 379 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 GTF3C1Q12789 2109 aa13.06□□□□□ -0.32
HDDC2-202ENST00000398153 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 USP9XQ93008 2570 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 TRGV5A0A0B4J1U4 118 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 E9PLN8 166 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 CCL21O00585 134 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 POLR3GO15318 223 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 DIAPH2O60879 1101 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 NME6O75414 186 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 SLC22A3O75751 556 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 HOXD4P09016 255 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 GDF1P27539 372 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 PTPN6P29350 595 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 EVI2BP34910 448 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 MAN2A2P49641 1150 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 TXNL4AP83876 142 aaKnown RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 FAM174BQ3ZCQ3 159 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 C1QL3Q5VWW1 255 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 MAVSQ7Z434 540 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 GOT1L1Q8NHS2 421 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 NEIL3Q8TAT5 605 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 PHF10Q8WUB8 498 aaKnown RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 EFHD2Q96C19 240 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 CCDC115Q96NT0 180 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 PSMG3-AS1Q96PY0 264 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 CCDC28BQ9BUN5 200 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 BTBD2Q9BX70 525 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 TP63Q9H3D4 680 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-202ENST00000398153 SLCO1B3Q9NPD5 702 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 TCF7L2Q9NQB0 619 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 TMEM45AQ9NWC5 275 aa13.05□□□□□ -0.32
HDDC2-202ENST00000398153 UQCRHLA0A096LP55 91 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 FADS1O60427 444 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 PDE9AO76083 593 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 KCNK2O95069 426 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 AGR2O95994 175 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 PGRP06401 933 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 ESRRAP11474 423 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-202ENST00000398153 CYP4B1P13584 511 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 EFNA1P20827 205 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-202ENST00000398153 AGAP20933 346 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 UQCRC2P22695 453 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 GAS1P54826 345 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 UFM1P61960 85 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 POU6F2P78424 691 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-202ENST00000398153 HSF1Q00613 529 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 LASP1Q14847 261 aaKnown RBP13.04□□□□□ -0.32
HDDC2-202ENST00000398153 C3AR1Q16581 482 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 NHSL2Q5HYW2 709 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 SPANXN4Q5MJ08 99 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 ANGPTL8Q6UXH0 198 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 RPTNQ6XPR3 784 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 MSANTD1Q6ZTZ1 278 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 FGD2Q7Z6J4 655 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 FJX1Q86VR8 437 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 DOLPP1Q86YN1 238 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 TRIML2Q8N7C3 387 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 COX18Q8N8Q8 333 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 OR4A15Q8NGL6 344 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 MIPOL1Q8TD10 442 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 ADAMTS15Q8TE58 950 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-202ENST00000398153 GNRHR2Q96P88 292 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 MEMO1Q9Y316 297 aa13.04□□□□□ -0.32
HDDC2-202ENST00000398153 ASH1LQ9NR48 2969 aaKnown RBP13.03□□□□□ -0.32
HDDC2-202ENST00000398153 FIGNL2A6NMB9 653 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 WDR1O75083 606 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 AK1P00568 194 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 TPOP07202 933 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 ACP2P11117 423 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 TBXA2RP21731 343 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 PTGER4P35408 488 aa13.03□□□□□ -0.32
HDDC2-202ENST00000398153 GCKP35557 465 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms