RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MKLN1Q9UL63 735 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SNX7Q9UNH6 387 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ISPDA4D126 451 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 POLR1CO15160 346 aaPredicted RBP17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 DNAJB6O75190 326 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CYP7B1O75881 506 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ALPPP05187 535 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 LAMP2P13473 410 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PSMA1P25786 263 aaKnown RBP17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NTSR1P30989 418 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ETV5P41161 510 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CRYBB2P43320 205 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ETV1P50549 477 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 GPLD1P80108 840 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 C16orf62Q7Z3J2 963 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SHISA5Q8N114 240 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CELF2-AS1Q8N7Q2 184 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SLC16A11Q8NCK7 471 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TOR1AIP2Q8NFQ8 470 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ZCCHC10Q8TBK6 192 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SLC9A6Q92581 669 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FAM46AQ96IP4 442 aaKnown RBP17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 BARHL1Q9BZE3 327 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 DZANK1Q9NVP4 752 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SLC13A4Q9UKG4 626 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PCDHGB6Q9Y5F9 930 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 KNL1Q8NG31 2342 aa17.18■□□□□ 0.34
CHRFAM7A-202ENST00000397827 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 A8MV72 311 aaPredicted RBP17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 MEN1O00255 615 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NR2F6P10588 404 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PDX1P52945 283 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CTAG1AP78358 180 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NDUFA9Q16795 377 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TMEM31Q5JXX7 168 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SPANXN2Q5MJ10 180 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ENTPD8Q5MY95 495 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 USP30Q70CQ3 517 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 IL17RCQ8NAC3 791 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PROKR2Q8NFJ6 384 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR8D4Q8NGM9 314 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TMEM203Q969S6 136 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 MOAP1Q96BY2 351 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OMA1Q96E52 524 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 GIMAP5Q96F15 307 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PAQR5Q9NXK6 330 aaPredicted RBP17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 A0A1W2PQF6 199 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FAM170BA6NMN3 283 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 KCNJ13O60928 360 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CCBE1Q6UXH8 406 aaPredicted RBP17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PAQR7Q86WK9 346 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NRROSQ86YC3 692 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR7G2Q8NG99 324 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ELSPBP1Q96BH3 223 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SLC35A4Q96G79 324 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SAP130Q9H0E3 1048 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SNTG1Q9NSN8 517 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ERVK13-1Q9NX77 482 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR6C2Q9NZP2 312 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 RGS5O15539 181 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 LRRTM2O43300 516 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 HOXB2P14652 356 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CTRB1P17538 263 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SMSP52788 366 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 EFNB1P98172 346 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 MXD1Q05195 221 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR2G6Q5TZ20 316 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 AGAP6Q5VW22 663 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CTRB2Q6GPI1 263 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ZNF730Q6ZMV8 503 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SHFQ7M4L6 423 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 PHC2Q8IXK0 858 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 OR5H6Q8NGV6 325 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FGF11Q92914 225 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 AGAP4Q96P64 663 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SRMSQ9H3Y6 488 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TMEM74BQ9NUR3 256 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 C14orf119Q9NWQ9 140 aa17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ARHGEF17Q96PE2 2063 aaPredicted RBP17.17■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CH25HO95992 272 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 DEFB134Q4QY38 66 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 FLYWCH1Q4VC44 716 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ATAT1Q5SQI0 421 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CCDC190Q86UF4 302 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NKAIN4Q8IVV8 208 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TEX47Q8TBZ9 253 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 ADAMTS15Q8TE58 950 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 SCARF2Q96GP6 870 aaPredicted RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 CEP19Q96LK0 163 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 C10orf90Q96M02 699 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TMEM168Q9H0V1 697 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 RPRD1BQ9NQG5 326 aaKnown RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 NDUFB11Q9NX14 153 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 TESQ9UGI8 421 aaKnown RBP17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 HEBP2Q9Y5Z4 205 aa17.16■□□□□ 0.34
CHRFAM7A-202ENST00000397827 RAB36O95755 333 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms