RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LRR1Q96L50 414 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 SDF2Q99470 211 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 POLR2J2Q9GZM3 115 aaKnown RBP15.68■□□□□ 0.1
NUP50-202ENST00000396096 SAP130Q9H0E3 1048 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 EGLN3Q9H6Z9 239 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 DAPK2Q9UIK4 370 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 SATB2Q9UPW6 733 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 CFL2Q9Y281 166 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 SPACA6W5XKT8 324 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 CYR61O00622 381 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 KIAA0513O60268 411 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PLOD3O60568 738 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 GPX5O75715 221 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 RAB36O95755 333 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 AVPR1BP47901 424 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PSMD7P51665 324 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 EEF1A1P68104 462 aaKnown RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 PRKCDQ05655 676 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 MLLT11Q13015 90 aaPredicted RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 EIF2B5Q13144 721 aaKnown RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 LARS2Q15031 903 aaKnown RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 SNAPC1Q16533 368 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 EIPR1Q53HC9 387 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 C3orf38Q5JPI3 329 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 ZCCHC12Q6PEW1 402 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 SLC36A4Q6YBV0 504 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 ZNF836Q6ZNA1 936 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PLEKHM3Q6ZWE6 761 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 OR52I1Q8NGK6 324 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 OR8D4Q8NGM9 314 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 SLC9A6Q92581 669 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 MCHR1Q99705 422 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PRRG3Q9BZD7 231 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 ZNF350Q9GZX5 532 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 KLHL25Q9H0H3 589 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 TCEAL2Q9H3H9 227 aaPredicted RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 SIAEQ9HAT2 523 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 CACYBPQ9HB71 228 aaKnown RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 FGF20Q9NP95 211 aaPredicted RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 SEC14L4Q9UDX3 406 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 SAGE2PA6NJ88 616 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PRODHO43272 600 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 GALR3O60755 368 aaPredicted RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 THY1P04216 161 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 CKMT1AP12532 417 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PVRP15151 417 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 TRMT12Q53H54 448 aaKnown RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 GDF7Q7Z4P5 450 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 CYP4Z2PQ8N1L4 340 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 SIMC1Q8NDZ2 872 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 SLC37A2Q8TED4 501 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
NUP50-202ENST00000396096 SLC41A3Q96GZ6 507 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 MSANTD3Q96H12 275 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 STACQ99469 402 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 DUSP22Q9NRW4 184 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 HRASLS2Q9NWW9 162 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 NDUFB11Q9NX14 153 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 PEX16Q9Y5Y5 336 aa15.67■□□□□ 0.1
NUP50-202ENST00000396096 CEP290O15078 2479 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 SPTY2D1-AS1A0A0U1RR47 76 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 SNTNA6NMZ2 147 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 KDM4EB2RXH2 506 aaPredicted RBP15.66■□□□□ 0.1
NUP50-202ENST00000396096 C2CD4DB7Z1M9 353 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 FGF17O60258 216 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 GPR75O95800 540 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 HBQ1P09105 142 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 ALOX5P09917 674 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 TGM1P22735 817 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 ETV6P41212 452 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 ZNF45Q02386 682 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 RAB40BQ12829 278 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 C1DQ13901 141 aaKnown RBP15.66■□□□□ 0.1
NUP50-202ENST00000396096 MBOAT2Q6ZWT7 520 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 RRM2BQ7LG56 351 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 NKAIN4Q8IVV8 208 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 RBM12BQ8IXT5 1001 aaKnown RBP15.66■□□□□ 0.1
NUP50-202ENST00000396096 CA13Q8N1Q1 262 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 ZNF619Q8N2I2 560 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 PMM1Q92871 262 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 OSTF1Q92882 214 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 FAM46AQ96IP4 442 aaKnown RBP15.66■□□□□ 0.1
NUP50-202ENST00000396096 SLC38A2Q96QD8 506 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 CNIH4Q9P003 139 aa15.66■□□□□ 0.1
NUP50-202ENST00000396096 A0A075B6Q4 140 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 ISPDA4D126 451 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 ZNF860A6NHJ4 632 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 MYL12BO14950 172 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 HNRNPCP07910 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
NUP50-202ENST00000396096 SOX6P35712 828 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 MAP3K8P41279 467 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 ZNF136P52737 540 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 MGAT2Q10469 447 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 FZD2Q14332 565 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 MINDY4Q4G0A6 757 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 PERM1Q5SV97 790 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 PRSS41Q7RTY9 318 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 CSNK1A1LQ8N752 337 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 CLDN22Q8N7P3 220 aa15.65■□□□□ 0.1
NUP50-202ENST00000396096 CDRT4Q8N9R6 151 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms