RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C2orf72A6NCS6 295 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 LRRC3CA6NJW4 275 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 ZNHIT1O43257 154 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 ASNA1O43681 348 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 TRIM3O75382 744 aaPredicted RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 UNC5CO95185 931 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 IL33O95760 270 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 IL6P05231 212 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 ALOX5P09917 674 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 RFPL3SP0C7P2 107 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 CDKN2CP42773 168 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 PRIM2P49643 509 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 CASP9P55211 416 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 RPP38P78345 283 aaKnown RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 MRPS22P82650 360 aaKnown RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 UBAP2LQ14157 1087 aaKnown RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 EIF2S3LQ2VIR3 472 aaKnown RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 VPS26BQ4G0F5 336 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 AGKQ53H12 422 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 BLOC1S3Q6QNY0 202 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 C6orf120Q7Z4R8 191 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 TMEM251Q8N6I4 163 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 GOT1L1Q8NHS2 421 aaPredicted RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 VPS33AQ96AX1 596 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 MOAP1Q96BY2 351 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 TMCO6Q96DC7 493 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 GPR137Q96N19 417 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 ACTRT3Q9BYD9 372 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 DEFB127Q9H1M4 99 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 SERHL2Q9H4I8 314 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 METTL7AQ9H8H3 244 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 IL1RL2Q9HB29 575 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 GALNT9Q9HCQ5 603 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 ZFP64Q9NPA5 681 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 SLC52A3Q9NQ40 469 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 SERHLQ9NQF3 203 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 FBXO34Q9NWN3 711 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 SEC14L3Q9UDX4 400 aa15.16■□□□□ 0.02
CXCL1-201ENST00000395761 UBR5O95071 2799 aaPredicted RBP15.16■□□□□ 0.02
CXCL1-201ENST00000395761 TENM4Q6N022 2769 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 EXPH5Q8NEV8 1989 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 RNF103-CHMP3A0A140T963 221 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 PRAMEF25A6NGN4 478 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 TFECO14948 347 aaPredicted RBP15.15■□□□□ 0.02
CXCL1-201ENST00000395761 ABCB7O75027 752 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 ICOSLGO75144 302 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 GSNP06396 782 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 CELA3AP09093 270 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 UQCRC2P22695 453 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 MAN2A2P49641 1150 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 HSF1Q00613 529 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 GABPB1Q06547 395 aaPredicted RBP15.15■□□□□ 0.02
CXCL1-201ENST00000395761 EFR3AQ14156 821 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 TIGD2Q4W5G0 525 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 CMPK2Q5EBM0 449 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 TBCELQ5QJ74 424 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 FNDC7Q5VTL7 733 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 CDC73Q6P1J9 531 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 TMEM81Q6P7N7 255 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 FIGNL1Q6PIW4 674 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 GFRALQ6UXV0 394 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 FITM2Q8N6M3 262 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 FAM110BQ8TC76 370 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 CDS1Q92903 461 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 PANX1Q96RD7 426 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 PIGUQ9H490 435 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 CCDC167Q9P0B6 97 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 FAF1Q9UNN5 650 aaPredicted RBP15.15■□□□□ 0.02
CXCL1-201ENST00000395761 HRH3Q9Y5N1 445 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 CAPN7Q9Y6W3 813 aa15.15■□□□□ 0.02
CXCL1-201ENST00000395761 RP1L1Q8IWN7 2480 aaPredicted RBP15.15■□□□□ 0.02
CXCL1-201ENST00000395761 MYO18BQ8IUG5 2567 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 CCDC154A6NI56 674 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 GNB5O14775 395 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 PDE9AO76083 593 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 KCNK2O95069 426 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 SNX4O95219 450 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 KCNH1O95259 989 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 MATN1P21941 496 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 PRDX6P30041 224 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 MAGEA5P43359 124 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 KCNC4Q03721 635 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 RCAN2Q14206 197 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 HYAL4Q2M3T9 481 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 KRTCAP3Q53RY4 240 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 CCNJQ5T5M9 372 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 SLC30A6Q6NXT4 461 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 BHLHB9Q6PI77 547 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 ZNF621Q6ZSS3 439 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 MSANTD1Q6ZTZ1 278 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 TRPM8Q7Z2W7 1104 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 ZAR1Q86SH2 424 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 PACS2Q86VP3 889 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 SLC22A16Q86VW1 577 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 COX18Q8N8Q8 333 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 OR5D16Q8NGK9 328 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 RP9Q8TA86 221 aaKnown RBP15.14■□□□□ 0.01
CXCL1-201ENST00000395761 PRR7Q8TB68 274 aa15.14■□□□□ 0.01
CXCL1-201ENST00000395761 ADAMTS15Q8TE58 950 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms