RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZNF675Q8TD23 568 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 HLA-CQ95604 372 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 FAM46AQ96IP4 442 aaKnown RBP14.04□□□□□ -0.16
GPC3-202ENST00000394299 PIGUQ9H490 435 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 RNF167Q9H6Y7 350 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 CLN6Q9NWW5 311 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 CALML5Q9NZT1 146 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 IL20RAQ9UHF4 553 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 SPACA6W5XKT8 324 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 FRYLO94915 3013 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 IGHV5-51A0A0C4DH38 117 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 J3QRK9 145 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 PIP5K1CO60331 668 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 PROS1P07225 676 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 INHBBP09529 407 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 GABRA3P34903 492 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 DCST2Q5T1A1 773 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 C12orf73Q69YU5 71 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 OR4N2Q8NGD1 307 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 TMEM255BQ8WV15 326 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 HSPBAP1Q96EW2 488 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 ITPAQ9BY32 194 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 TMEM184BQ9Y519 407 aaPredicted RBP14.04□□□□□ -0.16
GPC3-202ENST00000394299 CORINQ9Y5Q5 1042 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 ASXL3Q9C0F0 2248 aa14.04□□□□□ -0.16
GPC3-202ENST00000394299 hCG_2014768A0A024R1R8 64 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SYT5O00445 386 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PRKNO60260 465 aaPredicted RBP14.03□□□□□ -0.16
GPC3-202ENST00000394299 CKMT1AP12532 417 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PRKAR1BP31321 381 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 GIPRP48546 466 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 RAB38P57729 211 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
GPC3-202ENST00000394299 KCNAB1Q14722 419 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CLEC12AQ5QGZ9 265 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 MANEAQ5SRI9 462 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CASP12Q6UXS9 341 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 ZNF730Q6ZMV8 503 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 OR52R1Q8NGF1 315 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 OR8D4Q8NGM9 314 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SLC38A4Q969I6 547 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 LGALS12Q96DT0 336 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 IRAK4Q9NWZ3 460 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CLEC2DQ9UHP7 191 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 ENOPH1Q9UHY7 261 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PLOD3O60568 738 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CLPXO76031 633 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SLITRK5O94991 958 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CBX7O95931 251 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 ALOX5P09917 674 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 GADD45AP24522 165 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CAPZBP47756 277 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SLC13A2Q13183 592 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PRTGQ2VWP7 1150 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PLEKHM3Q6ZWE6 761 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 GDF7Q7Z4P5 450 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SLCO6A1Q86UG4 719 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 GALNT12Q8IXK2 581 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PEX5LQ8IYB4 626 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SLC15A4Q8N697 577 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 COX18Q8N8Q8 333 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 SLC25A19Q9HC21 320 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 GPR52Q9Y2T5 361 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 PMF1-BGLAPU3KQ54 211 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 A0A0C4DFX4 3053 aa14.03□□□□□ -0.16
GPC3-202ENST00000394299 CABIN1Q9Y6J0 2220 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 AGAP5A6NIR3 686 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 AP3D1O14617 1153 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 OR10H2O60403 315 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 MRPS14O60783 128 aaKnown RBP14.02□□□□□ -0.16
GPC3-202ENST00000394299 APOL3O95236 402 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 SSTR4P31391 388 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 GPR4P46093 362 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 FASLGP48023 281 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 ZNF136P52737 540 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 RACK1P63244 317 aaKnown RBP14.02□□□□□ -0.16
GPC3-202ENST00000394299 ALDH6A1Q02252 535 aaKnown RBP14.02□□□□□ -0.16
GPC3-202ENST00000394299 DMWDQ09019 674 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 IRF3Q14653 427 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 TBCEQ15813 527 aaPredicted RBP14.02□□□□□ -0.16
GPC3-202ENST00000394299 PAQR6Q6TCH4 344 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 GKN2Q86XP6 184 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 CTHRC1Q96CG8 243 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 SPRTNQ9H040 489 aaPredicted RBP14.02□□□□□ -0.16
GPC3-202ENST00000394299 KLHL28Q9NXS3 571 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 SLC7A7Q9UM01 511 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 COLQQ9Y215 455 aaPredicted RBP14.02□□□□□ -0.16
GPC3-202ENST00000394299 DTX4Q9Y2E6 619 aa14.02□□□□□ -0.16
GPC3-202ENST00000394299 THADAQ6YHU6 1953 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 AQP9O43315 295 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 CH25HO95992 272 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 DCNP07585 359 aaKnown RBP14.02□□□□□ -0.17
GPC3-202ENST00000394299 FUT1P19526 365 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 SLC15A1P46059 708 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 EEF1A1P68104 462 aaKnown RBP14.02□□□□□ -0.17
GPC3-202ENST00000394299 TRAM2Q15035 370 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 MED22Q15528 200 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 ARMCX4Q5H9R4 360 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 NRMQ8IXM6 262 aa14.02□□□□□ -0.17
GPC3-202ENST00000394299 RBM12BQ8IXT5 1001 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms