RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 COL26A1Q96A83 441 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 SECISBP2Q96T21 854 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 TBX5Q99593 518 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ATF6BQ99941 703 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PRDM7Q9NQW5 492 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 MRPS18AQ9NVS2 196 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 IRGMA1A4Y4 181 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 C1QTNF3-AMACRE9PGA6 284 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 GABRPO00591 440 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PAK4O96013 591 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 TIMP1P01033 207 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 RAB28P51157 221 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PRMT2P55345 433 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF155Q12901 538 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 GNA13Q14344 377 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 TATDN3Q17R31 274 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ABHD17CQ6PCB6 329 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 BHLHB9Q6PI77 547 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 RASSF6Q6ZTQ3 369 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 FBXL6Q8N531 539 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 TMEM255BQ8WV15 326 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF764Q96H86 408 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 SLC6A20Q9NP91 592 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 TRDV1A0A1B0GX56 115 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ZC3H12DA2A288 527 aaKnown RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 YES1P07947 543 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 CSNK2A2P19784 350 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PDX1P52945 283 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 RAB25P57735 213 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ST3GAL3Q11203 375 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 DUSP6Q16828 381 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 GAB4Q2WGN9 574 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 C6orf132Q5T0Z8 1188 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 OR56A1Q8NGH5 318 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PRSS16Q9NQE7 514 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 CXXC1Q9P0U4 656 aaPredicted RBP13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 ALG5Q9Y673 324 aa13.06□□□□□ -0.32
GAPVD1-205ENST00000394084 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM25AB3EWG3 89 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM25CB3EWG5 89 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM25GB3EWG6 89 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 HRO43593 1189 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 ZIC2O95409 532 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FGF9P31371 208 aaPredicted RBP13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 CTBP2P56545 445 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 PRR5P85299 388 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 SYCE2Q6PIF2 218 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 TMEM64Q6YI46 380 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF485Q8NCK3 441 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 OR51G2Q8NGK0 314 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 GFM1Q96RP9 751 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 MCHR1Q99705 422 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 GIMAP4Q9NUV9 329 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 SPHK1Q9NYA1 384 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 LIPT1Q9Y234 373 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 LOC102723532A0A0G2JNH3 316 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FAM240BA0A1B0GVZ2 78 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 SURF4O15260 269 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 MID1O15344 667 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 EMC8O43402 210 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 THY1P04216 161 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 TRAPPC2P0DI81 140 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 TRAPPC2BP0DI82 140 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 FUT1P19526 365 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 INPP1P49441 399 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 AADACL4Q5VUY2 407 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 KLHL36Q8N4N3 616 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 YIPF7Q8N8F6 280 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 ARHGDIGQ99819 225 aa13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 ISG20L2Q9H9L3 353 aaKnown RBP13.05□□□□□ -0.32
GAPVD1-205ENST00000394084 SYNDIG1LA6NDD5 238 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 NARSO43776 548 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 CPNE3O75131 537 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 MRGPREQ86SM8 312 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 CPOQ8IVL8 374 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ZNF707Q96C28 371 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 ELP4Q96EB1 424 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SAMD8Q96LT4 415 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 GDF15Q99988 308 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 MED20Q9H944 212 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 H2AFY2Q9P0M6 372 aaPredicted RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SERGEFQ9UGK8 458 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 APOBEC3BQ9UH17 382 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 INSL6Q9Y581 213 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SMLR1H3BR10 107 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SEC14L5O43304 696 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 SCO2O43819 266 aa13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 AKAP8O43823 692 aaKnown RBP13.04□□□□□ -0.32
GAPVD1-205ENST00000394084 EFCAB14O75071 495 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms