RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GPATCH2Q9NW75 528 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 GIN1Q9NXP7 522 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 B4GALT7Q9UBV7 327 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 OSGIN2Q9Y236 505 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 PCDHGB3Q9Y5G1 929 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 POLEQ07864 2286 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 RNF103-CHMP3A0A140T963 221 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 FAM234BA2RU67 622 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 CDC40O60508 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 TROVE2P10155 538 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 MATN1P21941 496 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 MAGEA5P43359 124 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 POU6F2P78424 691 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 EXOSC6Q5RKV6 272 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 TRIML2Q8N7C3 387 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 GOT1L1Q8NHS2 421 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 NTNG2Q96CW9 530 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 PANX1Q96RD7 426 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 BTBD2Q9BX70 525 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 ZDHHC11Q9H8X9 412 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 TRIM33Q9UPN9 1127 aa17.39■□□□□ 0.37
PDLIM7-204ENST00000393546 A0A0G2JND7 137 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 C2orf72A6NCS6 295 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 LRRC3CA6NJW4 275 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 DUXAA6NLW8 204 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 PDE9AO76083 593 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 KCNK2O95069 426 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 NCF2P19878 526 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 PTGDSP41222 190 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 CLK3P49761 638 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 ATP4BP51164 291 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 TIGD3Q6B0B8 471 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 ZNF621Q6ZSS3 439 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 MSANTD1Q6ZTZ1 278 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 CLEC4FQ8N1N0 589 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 OR9I1Q8NGQ6 314 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 OR1J4Q8NGS1 313 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 FAM110BQ8TC76 370 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 OTUB1Q96FW1 271 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 SLC35G5Q96KT7 338 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 G6PC3Q9BUM1 346 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 RMND5AQ9H871 391 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 GALNT9Q9HCQ5 603 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 QPCTLQ9NXS2 382 aa17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 UBR5O95071 2799 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-204ENST00000393546 CCDC154A6NI56 674 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 GNB5O14775 395 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 IGKV1D-16P01601 117 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 RFPL3SP0C7P2 107 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 ELAVL4P26378 380 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 LCN1P31025 176 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 CHI3L1P36222 383 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 ZFP36L2P47974 494 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 FIGNL1Q6PIW4 674 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 ANGPTL8Q6UXH0 198 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 CDS1Q92903 461 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 GNRHR2Q96P88 292 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 OR7D2Q96RA2 312 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 SLC35A5Q9BS91 424 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 INPP5KQ9BT40 448 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 LDAHQ9H6V9 325 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 SDHAF3Q9NRP4 125 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 TMEM45AQ9NWC5 275 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 ABCG2Q9UNQ0 655 aa17.37■□□□□ 0.37
PDLIM7-204ENST00000393546 GTF3C1Q12789 2109 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 A0A1B0GTH9 108 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 RFXANKO14593 260 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 SNPHO15079 494 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 FADS1O60427 444 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 UTS2O95399 124 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 STSP08842 583 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 ABOP16442 354 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 GDF1P27539 372 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 EVI2BP34910 448 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 MAN2A2P49641 1150 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 CASP6P55212 293 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 HSF1Q00613 529 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 SQLEQ14534 574 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 TIGD2Q4W5G0 525 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 FNDC7Q5VTL7 733 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 METTL21CQ5VZV1 264 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 SAXO2Q658L1 398 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 ARHGAP11AQ6P4F7 1023 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 SPPL2CQ8IUH8 684 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 RNF138Q8WVD3 245 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 NEURL3Q96EH8 262 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 ITCHQ96J02 903 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 RABEP2Q9H5N1 569 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 ZNF703Q9H7S9 590 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 ACKR4Q9NPB9 350 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 PLSCR2Q9NRY7 297 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 C15orf41Q9Y2V0 281 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 WIF1Q9Y5W5 379 aa17.36■□□□□ 0.37
PDLIM7-204ENST00000393546 SLC19A2O60779 497 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 CBR3O75828 277 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 TRAPPC6AO75865 159 aa17.35■□□□□ 0.37
PDLIM7-204ENST00000393546 ANP32DO95626 131 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms