RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CELP19835 753 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 AK4P27144 223 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 FRKP42685 505 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 MAP2K3P46734 347 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 SMSP52788 366 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 MLF2Q15773 248 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 DUSP6Q16828 381 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 LCN1P1Q5VSP4 162 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 PPP2R2DQ66LE6 453 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 HSDL2Q6YN16 418 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 COX14Q96I36 57 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 LINC00615Q96LM1 132 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 CENPBD1B2RD01 187 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 H0Y8X5 98 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 PRODHO43272 600 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 ERI3O43414 337 aaKnown RBP15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 HRO43593 1189 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC2A10O95528 541 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 MLLT3P42568 568 aaPredicted RBP15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 CTBP2P56545 445 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 CAMK2BQ13554 666 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 CCDC85BQ15834 202 aaPredicted RBP15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 TRIQKQ629K1 86 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 FRMD1Q8N878 549 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 OR4E2Q8NGC2 313 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 CAMK1GQ96NX5 476 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 PPP1R3EQ9H7J1 279 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 GIMAP4Q9NUV9 329 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 A0A1B0GVC2 190 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 A6NIN4 97 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 ALAS2P22557 587 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 SMIM11AP58511 58 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 TPBGQ13641 420 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 NUDT13Q86X67 352 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 VRK2Q86Y07 508 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 IL17RCQ8NAC3 791 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 C17orf50Q8WW18 174 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 HDAC8Q9BY41 377 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 RHBGQ9H310 441 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 SPHK1Q9NYA1 384 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC9A8Q9Y2E8 581 aa15.24■□□□□ 0.03
NKX3-1-201ENST00000380871 FAM170BA6NMN3 283 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 PGRMC2O15173 223 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 SEC14L5O43304 696 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 NARSO43776 548 aaKnown RBP15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 RPN2P04844 631 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 HMGN2P05204 90 aaKnown RBP15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TRAPPC2P0DI81 140 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TRAPPC2BP0DI82 140 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 GNSP15586 552 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 SDHBP21912 280 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 GABRA5P31644 462 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC27A4Q6P1M0 643 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC36A4Q6YBV0 504 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 C19orf18Q8NEA5 215 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TEX47Q8TBZ9 253 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ZFPM2Q8WW38 1151 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 OTULINQ96BN8 352 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ART5Q96L15 291 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 BBS4Q96RK4 519 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ATF6BQ99941 703 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 STK25O00506 426 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 UBXN7O94888 489 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 DDX5P17844 614 aaKnown RBP15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 HTR2BP41595 481 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC1A3P43003 542 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 RAB40BQ12829 278 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 KLHL22Q53GT1 634 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 MARCH9Q86YJ5 346 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 CCDC116Q8IYX3 515 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 COL26A1Q96A83 441 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 PRRC1Q96M27 445 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ARHGAP9Q9BRR9 750 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 SEMA4GQ9NTN9 838 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ACOXLQ9NUZ1 547 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 A0A1W2PPV9 198 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TMEM129A0AVI4 362 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 FAM183AA6NL82 134 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 PPP2R1BP30154 601 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TRHRP34981 398 aaPredicted RBP15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 GPR4P46093 362 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TAS2R41P59536 307 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 CSNK1G2P78368 415 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 COX10Q12887 443 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 LRRC32Q14392 662 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ENTPD8Q5MY95 495 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 TMEM107Q6UX40 140 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 IL20RBQ6UXL0 311 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 CD300LDQ6UXZ3 194 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 ZNF485Q8NCK3 441 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 OR4Q3Q8NH05 313 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 RAB7BQ96AH8 199 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 POLMQ9NP87 494 aaPredicted RBP15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 MCUBQ9NWR8 336 aa15.23■□□□□ 0.03
NKX3-1-201ENST00000380871 POM121BA6NF01 834 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 ALX3O95076 343 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 ACADMP11310 421 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 TRIM23P36406 574 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms