RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SMSP52788 366 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 PDX1P52945 283 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 NUDT6P53370 316 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 RGS8P57771 180 aaPredicted RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 VSX2P58304 361 aaPredicted RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 DUSP8Q13202 625 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 NCF4Q15080 339 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 DECR1Q16698 335 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 C11orf91Q3C1V1 193 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 MFSD4BQ5TF39 518 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 TMEM236Q5W0B7 351 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 PLAG1Q6DJT9 500 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 TYW3Q6IPR3 259 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 TSSK4Q6SA08 328 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC46A3Q7Z3Q1 461 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ARHGAP22Q7Z5H3 698 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 VRK2Q86Y07 508 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF619Q8N2I2 560 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SDR16C5Q8N3Y7 309 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 C19orf47Q8N9M1 422 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC16A11Q8NCK7 471 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 PIGXQ8TBF5 258 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC9A6Q92581 669 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 DIO2Q92813 273 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CDS1Q92903 461 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC6A18Q96N87 628 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 LRRC61Q9BV99 259 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 WDR12Q9GZL7 423 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF350Q9GZX5 532 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 SAP130Q9H0E3 1048 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 KLHL25Q9H0H3 589 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 LMAN1LQ9HAT1 526 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 B3GNT3Q9Y2A9 372 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 MRPS2Q9Y399 296 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 CNOT1A5YKK6 2376 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 TMEM131Q92545 1883 aa9.78□□□□□ -0.84
POLR2J3-201ENST00000379340 ANKRD11Q6UB99 2663 aaPredicted RBP9.77□□□□□ -0.84
POLR2J3-201ENST00000379340 HYKKA2RU49 373 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SNTNA6NMZ2 147 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 B4DGG1 531 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 M0R082 166 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 MAN1A2O60476 641 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 STX11O75558 287 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SOX14O95416 240 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 CSF2P04141 144 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 RPLP0P05388 317 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 DBIP07108 87 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC35E2P0CK97 266 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 NME1P15531 152 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 NT5EP21589 574 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 RPS4Y1P22090 263 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 CD38P28907 300 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 C21orf59P57076 290 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SHC2P98077 582 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 CDK5Q00535 292 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 RHAGQ02094 409 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 TSPAN31Q12999 210 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF846Q147U1 533 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 DUSP5Q16690 384 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEM44Q2T9K0 475 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 TIMM50Q3ZCQ8 353 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF542PQ5EBM4 170 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 RASSF6Q6ZTQ3 369 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 PLEKHM3Q6ZWE6 761 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 RRM2BQ7LG56 351 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 OLIG3Q7RTU3 272 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 ZER1Q7Z7L7 766 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SLCO6A1Q86UG4 719 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 RANBP3LQ86VV4 465 aaPredicted RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 FAM26EQ8N5C1 309 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 CADM4Q8NFZ8 388 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 DYNC2LI1Q8TCX1 351 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 ACOT11Q8WXI4 607 aaPredicted RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 LGALS12Q96DT0 336 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SDF2Q99470 211 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 MCHR1Q99705 422 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 TEX12Q9BXU0 123 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 ARMC7Q9H6L4 198 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 HMG20AQ9NP66 347 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 AMBNQ9NP70 447 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 SCN3AQ9NY46 2000 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 MKLN1Q9UL63 735 aa9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 MRPS33Q9Y291 106 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-201ENST00000379340 A0A087WUU8 490 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 A0A1W2PR77 199 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF860A6NHJ4 632 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 AGAP5A6NIR3 686 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 FAM170BA6NMN3 283 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 METTL12A8MUP2 240 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 EFCAB9A8MZ26 197 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 AIREO43918 545 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 FGF17O60258 216 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 FMO6PO60774 539 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ENTPD6O75354 484 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 UBXN7O94888 489 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms