RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 DTX3Q8N9I9 347 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 WDR20Q8TBZ3 569 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 DEFB126Q9BYW3 111 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 CLEC4EQ9ULY5 219 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 CSNK1G3Q9Y6M4 447 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 M0R129 80 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 PLGP00747 810 aaPredicted RBP10.66□□□□□ -0.7
RPGR-203ENST00000378505 VEGFBP49765 207 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 HNRNPKP61978 463 aaKnown RBP eCLIP10.66□□□□□ -0.7
RPGR-203ENST00000378505 ACVR1Q04771 509 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 MAP4K2Q12851 820 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 SERTAD2Q14140 314 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 ZNF283Q8N7M2 679 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 TMEM239Q8WW34 195 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 FGF13Q92913 245 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 TIMM29Q9BSF4 260 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 TUBB1Q9H4B7 451 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 ZBTB20Q9HC78 741 aaPredicted RBP10.66□□□□□ -0.7
RPGR-203ENST00000378505 PCDHB16Q9NRJ7 776 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 EPHA6Q9UF33 1036 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 TEX13DA0A0J9YY54 714 aaPredicted RBP10.66□□□□□ -0.7
RPGR-203ENST00000378505 C13orf42A0A1B0GVH6 325 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 PEX12O00623 359 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 CDC40O60508 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
RPGR-203ENST00000378505 FMO6PO60774 539 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 GIPRP48546 466 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 SGSHP51688 502 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 SLCO4C1Q6ZQN7 724 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 RFLNAQ6ZTI6 216 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 GAREM2Q75VX8 874 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 TMEM173Q86WV6 379 aaPredicted RBP10.66□□□□□ -0.7
RPGR-203ENST00000378505 MFSD6LQ8IWD5 586 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 OR4C15Q8NGM1 316 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 ALG8Q9BVK2 526 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 SAP130Q9H0E3 1048 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 CARD8Q9Y2G2 431 aa10.66□□□□□ -0.7
RPGR-203ENST00000378505 APOC1P02654 83 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ZNF888P0CJ79 500 aaPredicted RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 UGT2B10P36537 528 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 CTXN1P60606 82 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 TAP2Q03519 686 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 SMN1Q16637 294 aaKnown RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 SH2D5Q6ZV89 423 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 MAMDC2Q7Z304 686 aaPredicted RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 CYB561A3Q8NBI2 242 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ADAMTS19Q8TE59 1207 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 TANKQ92844 425 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 HHATLQ9HCP6 504 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ACTR10Q9NZ32 417 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ADAM29Q9UKF5 820 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 B3GNT3Q9Y2A9 372 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 NRAPQ86VF7 1730 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 NUP205Q92621 2012 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 NOTOA8MTQ0 251 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 PHYHO14832 338 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 IGLV3-25P01717 112 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 SOX3P41225 446 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 RIDAP52758 137 aaKnown RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 PODNL1Q6PEZ8 512 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ZNF584Q8IVC4 421 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ZNF619Q8N2I2 560 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 VWA5B2Q8N398 1253 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 OR2L8Q8NGY9 312 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 SFXN5Q8TD22 340 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 MYLIPQ8WY64 445 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ITFG2Q969R8 447 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 BMFQ96LC9 184 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ATG5Q9H1Y0 275 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 CD93Q9NPY3 652 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 MGAT4AQ9UM21 535 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 C14orf166Q9Y224 244 aaKnown RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 KRBA1A5PL33 1030 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 CLDN24A6NM45 220 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 PROS1P07225 676 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 ATF4P18848 351 aaPredicted RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 ART1P52961 327 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 DEFA5Q01523 94 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 LRIF1Q5T3J3 769 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 SLC22A10Q63ZE4 541 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 USP53Q70EK8 1073 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 OR6Q1Q8NGQ2 317 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 GGHQ92820 318 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.7
RPGR-203ENST00000378505 USP54Q70EL1 1684 aa10.65□□□□□ -0.7
RPGR-203ENST00000378505 LAMB1P07942 1786 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 A0A1W2PPL8 197 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 WASHC1A8K0Z3 465 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 WASH3PC4AMC7 463 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 CHP2O43745 196 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 AP1G1O43747 822 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 TRAPPC6AO75865 159 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 PPP1R3DO95685 299 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 GRPRP30550 384 aa10.65□□□□□ -0.71
RPGR-203ENST00000378505 CLRN1P58418 232 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms