RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PINLYPA6NC86 204 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 KINO60870 393 aaKnown RBP2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 NR2C1P13056 603 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 CTNNA1P35221 906 aaKnown RBP2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 MORF4L2Q15014 288 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 ZNF658BQ4V348 819 aaPredicted RBP2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 DLEU7Q6UYE1 221 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 TFAP2EQ6VUC0 442 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 CNTN4Q8IWV2 1026 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 LRRC17Q8N6Y2 441 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 ARNTL2Q8WYA1 636 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 KRT35Q92764 455 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 CARD6Q9BX69 1037 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 GLT8D2Q9H1C3 349 aa2.9□□□□□ -1.95
RNU4-28P-201ENST00000364739 ANKRD30BQ9BXX2 1392 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 VEGFDO43915 354 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 ASNSP08243 561 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 CDH5P33151 784 aaPredicted RBP2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 SLC26A2P50443 739 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 SRP54P61011 504 aaKnown RBP2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 MECOMQ03112 1051 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 UBXN1Q04323 297 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 SRYQ05066 204 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 CCDC14Q49A88 953 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 AGKQ53H12 422 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 ZCCHC12Q6PEW1 402 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 MKXQ8IYA7 352 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 ENTHD1Q8IYW4 607 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 COLGALT1Q8NBJ5 622 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 TMEM185AQ8NFB2 350 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 ART4Q93070 314 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 VMP1Q96GC9 406 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 IL4I1Q96RQ9 567 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 COQ7Q99807 217 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 EBF4Q9BQW3 602 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 NDUFAF3Q9BU61 184 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 SIRPDQ9H106 197 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 PTGES2Q9H7Z7 377 aa2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 DUS2Q9NX74 493 aaKnown RBP2.89□□□□□ -1.95
RNU4-28P-201ENST00000364739 LTBP1Q14766 1721 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 E9PLD3 99 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 BUB1O43683 1085 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 HSF2BPO75031 334 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 RPL32P62910 135 aaKnown RBP2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 NME3Q13232 169 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 TSTA3Q13630 321 aaPredicted RBP2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 KCNJ11Q14654 390 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 SLX4IPQ5VYV7 408 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 Q6P435 159 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 CXCL17Q6UXB2 119 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 IL34Q6ZMJ4 242 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 ADAMTSL2Q86TH1 951 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 CCDC36Q8IYA8 594 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 PEX5LQ8IYB4 626 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 WDR36Q8NI36 951 aaKnown RBP2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 TADA1Q96BN2 335 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 MYOZ2Q9NPC6 264 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 COMMD8Q9NX08 183 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 L3MBTL1Q9Y468 752 aa2.88□□□□□ -1.95
RNU4-28P-201ENST00000364739 ZNFX1Q9P2E3 1918 aaKnown RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 SCRG1O75711 98 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 LIM2P55344 173 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 DPYSQ14117 519 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 LASP1Q14847 261 aaKnown RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 UBE2V2Q15819 145 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 CYP51A1Q16850 503 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 PARP6Q2NL67 630 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 OR2B11Q5JQS5 317 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 SLC39A4Q6P5W5 647 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 FRA10AC1Q70Z53 315 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 HSD17B13Q7Z5P4 300 aaPredicted RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 PSMA8Q8TAA3 256 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 PSMG2Q969U7 264 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 HAVCR1Q96D42 359 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 TEX13AQ9BXU3 409 aaPredicted RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 DDX47Q9H0S4 455 aaKnown RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 PNO1Q9NRX1 252 aaKnown RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 GHRLQ9UBU3 117 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 TRMT6Q9UJA5 497 aaKnown RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 TDRKHQ9Y2W6 561 aaKnown RBP2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 PPIAL4AQ9Y536 164 aa2.87□□□□□ -1.95
RNU4-28P-201ENST00000364739 H0YL77 283 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 ADAM12O43184 909 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 PPIHO43447 177 aaKnown RBP2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 HTATSF1O43719 755 aaKnown RBP2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 ANP32DO95626 131 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 TIMP1P01033 207 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 JCHAINP01591 159 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 ABHD2P08910 425 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 VDRP11473 427 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 TSPAN8P19075 237 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 PLOD1Q02809 727 aaPredicted RBP2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 RPA4Q13156 261 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 ORC2Q13416 577 aaPredicted RBP2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 LRIT3Q3SXY7 679 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 ACSF3Q4G176 576 aaPredicted RBP2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 TMEM52BQ4KMG9 183 aa2.86□□□□□ -1.95
RNU4-28P-201ENST00000364739 BTNL3Q6UXE8 466 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms