RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ZFAND1Q8TCF1 268 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■□□ 19.1
SMC5-201ENST00000361138 FCRL1Q96LA6 429 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 M0QZQ0 153 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 PROS1P07225 676 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 CSF1P09603 554 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ARNTP27540 789 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 DLSTP36957 453 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 SPINT3P49223 89 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ACTBP60709 375 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ACTG1P63261 375 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 DBPQ10586 325 aaPredicted RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 ASAH1Q13510 395 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 FCRLBQ6BAA4 426 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 CELF5Q8N6W0 485 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 PMEPA1Q969W9 287 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 METTL2AQ96IZ6 378 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 IL17FQ96PD4 163 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ZNF559Q9BR84 538 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 TMEM168Q9H0V1 697 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 TRAPPC13A5PLN9 417 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ZBTB42B2RXF5 422 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 TGM6O95932 706 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 SPNP16150 400 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 DDCP20711 480 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 IRF5Q13568 498 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 FCN2Q15485 313 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ACSM3Q53FZ2 586 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 KCTD20Q7Z5Y7 419 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 APCDD1Q8J025 514 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 BRIX1Q8TDN6 353 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ACTR10Q9NZ32 417 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 POM121CA8CG34 1229 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 LEFTY2O00292 366 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 EIF1AYO14602 144 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 SFTPBP07988 381 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 UBBP0CG47 229 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 UBCP0CG48 685 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 ADH6P28332 368 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 RPS19P39019 145 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 EIF1AXP47813 144 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 RPS27AP62979 156 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 UBA52P62987 128 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 ID2Q02363 134 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 OPCMLQ14982 345 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 GGTA1PQ4G0N0 100 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 TP53I3Q53FA7 332 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 C3orf38Q5JPI3 329 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 PIP5KL1Q5T9C9 394 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 OR5D16Q8NGK9 328 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 PCNPQ8WW12 178 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 COL16A1Q07092 1604 aaPredicted RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 ACOT7O00154 380 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 POLR1CO15160 346 aaPredicted RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 NDUFS1P28331 727 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ETV1P50549 477 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 SELENBP1Q13228 472 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ALG1LQ6GMV1 187 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 OR8J2Q8NGG1 315 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 FYTTD1Q96QD9 318 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 EDDM13A0A1B0GTR0 161 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 RBMXL2O75526 392 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 SLC16A8O95907 504 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 AMY2AP04746 511 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 MRPS10P82664 201 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 ZNF805Q5CZA5 627 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 TRIM46Q7Z4K8 759 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 OR5AK2Q8NH90 309 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 NIPSNAP1Q9BPW8 284 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 DPH1Q9BZG8 443 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 LTB4R2Q9NPC1 389 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 VNN3Q9NY84 501 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 ZNF840PA6NDX5 716 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 FZD7O75084 574 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 PPP1R3DO95685 299 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 TYRP14679 529 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 AKR1C4P17516 323 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 GABRA3P34903 492 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 CRYZQ08257 329 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 AMZ1Q400G9 498 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 NKAPLQ5M9Q1 402 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 MTFR2Q6P444 385 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 LRRC25Q8N386 305 aaPredicted RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 RNF175Q8N4F7 328 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 UBTD2Q8WUN7 234 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 CSNK1G1Q9HCP0 422 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 DIMT1Q9UNQ2 313 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 WASH3PC4AMC7 463 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms