RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CTU2Q2VPK5 515 aaKnown RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 GPAT3Q53EU6 434 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 REEP3Q6NUK4 255 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ABHD13Q7L211 337 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 GKN2Q86XP6 184 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 SLC35F3Q8IY50 421 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 PRSS58Q8IYP2 241 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 CENPSQ8N2Z9 138 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ATG16L2Q8NAA4 619 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 CAMKVQ8NCB2 501 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 NUP43Q8NFH3 380 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 CADM4Q8NFZ8 388 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 OR5K1Q8NHB7 308 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 CNIH3Q8TBE1 160 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 NT5CQ8TCD5 201 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ELP4Q96EB1 424 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 PEX11GQ96HA9 241 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 SMIM10Q96HG1 83 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 SERINC2Q96SA4 455 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 RHNO1Q9BSD3 238 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 C6orf62Q9GZU0 229 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 SEMA6CQ9H3T2 930 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 MAGIXQ9H6Y5 334 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 SYNDIG1Q9H7V2 258 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 NEUROD4Q9HD90 331 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ACSS1Q9NUB1 689 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 FBXO34Q9NWN3 711 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 FAM118AQ9NWS6 357 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 RSL24D1Q9UHA3 163 aaKnown RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ATXN7L1Q9ULK2 861 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-202ENST00000359366 EDARQ9UNE0 448 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ANGPT4Q9Y264 503 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 NTNG1Q9Y2I2 539 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF175Q9Y473 711 aa4.76□□□□□ -1.65
ATXN3-202ENST00000359366 LMO7DNF2Z398 122 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TGFBR3LH3BV60 316 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 H6PDO95479 791 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 AVPP01185 164 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 IGFBP1P08833 259 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MAOAP21397 527 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 NT5EP21589 574 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MYF6P23409 242 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 IGFBP5P24593 272 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MPIP34949 423 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 BUD31P41223 144 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MAPK10P53779 464 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 HNRNPKP61978 463 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CSTF1Q05048 431 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TGM3Q08188 693 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TEAD4Q15561 434 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF124Q15973 351 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SMN1Q16637 294 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF630Q2M218 657 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 IFI44LQ53G44 452 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 KLHL17Q6TDP4 642 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RNF44Q7L0R7 432 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TMPRSS9Q7Z410 1059 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 HDDC2Q7Z4H3 204 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GJD3Q8N144 294 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CA13Q8N1Q1 262 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LRRC25Q8N386 305 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SLC5A8Q8N695 610 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF655Q8N720 491 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SRFBP1Q8NEF9 429 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TSPAN14Q8NG11 270 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 OR4K14Q8NGD5 310 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 OR52E4Q8NGH9 312 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 IPCEF1Q8WWN9 437 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PIK3R3Q92569 461 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PIGKQ92643 395 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CDS1Q92903 461 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GTPBP3Q969Y2 492 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RMND5BQ96G75 393 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 AHCYL2Q96HN2 611 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 OR7D2Q96RA2 312 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 NIPSNAP1Q9BPW8 284 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 NUDT22Q9BRQ3 303 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 OR2B2Q9GZK3 357 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 TMEM38AQ9H6F2 299 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 REEP1Q9H902 201 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ATP13A2Q9NQ11 1180 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 RASSF1Q9NS23 344 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 DHCR7Q9UBM7 475 aaKnown RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF69Q9UC07 566 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SEC14L3Q9UDX4 400 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 LAMP5Q9UJQ1 280 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 MKLN1Q9UL63 735 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SLC6A14Q9UN76 642 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 POLHQ9Y253 713 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 GPR55Q9Y2T6 319 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PCDHGA8Q9Y5G5 932 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PCDHGA3Q9Y5H0 932 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 PCDHGA2Q9Y5H1 932 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 ENTPD2Q9Y5L3 495 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 SLC22A7Q9Y694 548 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 CACNG2Q9Y698 323 aa4.75□□□□□ -1.65
ATXN3-202ENST00000359366 KNTC1P50748 2209 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms