RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 FBXL20Q96IG2 436 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 VSTM2LQ96N03 204 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 SLC46A1Q96NT5 459 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 OR10A5Q9H207 317 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 ANKRD19PQ9H560 264 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 SYNDIG1Q9H7V2 258 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 Q9N2J8 555 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 NECTIN3Q9NQS3 549 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 FBXO8Q9NRD0 319 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 HSPE1-MOB4S4R3N1 261 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 U3KQV3 271 aa12.55□□□□□ -0.4
CCDC197-201ENST00000359253 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 AGAP5A6NIR3 686 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 OR6C76A6NM76 312 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 C17orf105B2RV13 164 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 TGFBR3LH3BV60 316 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 KIAA0513O60268 411 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 BRINP1O60477 761 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 CDC123O75794 336 aaPredicted RBP12.54□□□□□ -0.4
CCDC197-201ENST00000359253 SNAP29O95721 258 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 IL7RP16871 459 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 MAOAP21397 527 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 RPS4Y1P22090 263 aaKnown RBP12.54□□□□□ -0.4
CCDC197-201ENST00000359253 CCKBRP32239 447 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 GABRA3P34903 492 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 IST1P53990 364 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 EXOSC7Q15024 291 aaKnown RBP12.54□□□□□ -0.4
CCDC197-201ENST00000359253 PHF19Q5T6S3 580 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 TCTN3Q6NUS6 607 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 TMEM151BQ8IW70 566 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 TAGAPQ8N103 731 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 METTL27Q8N6F8 245 aaPredicted RBP12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ZNF615Q8N8J6 731 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ATG16L2Q8NAA4 619 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 CYGBQ8WWM9 190 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 LRFN5Q96NI6 719 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ARHGDIGQ99819 225 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ZNF696Q9H7X3 374 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ANKRA2Q9H9E1 313 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ZNF556Q9HAH1 456 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 SMURF2Q9HAU4 748 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 VNN3Q9NY84 501 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 MRTO4Q9UKD2 239 aaKnown RBP12.54□□□□□ -0.4
CCDC197-201ENST00000359253 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 TESMINQ9Y4I5 508 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 AK5Q9Y6K8 562 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
CCDC197-201ENST00000359253 ADAMTS20P59510 1910 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 A0A1W2PRQ8 180 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 B4E171 279 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 FAAHO00519 579 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 POLR1CO15160 346 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 FCMRO60667 390 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CPNE3O75131 537 aaKnown RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 DIRAS1O95057 198 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CCNB2O95067 398 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 RECKO95980 971 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 H1F0P07305 194 aaKnown RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CD63P08962 238 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 AGXTP21549 392 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 TSPAN7P41732 249 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 DAPP51397 102 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CDH12P55289 794 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 PSG6Q00889 435 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 MC2RQ01718 297 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 DGCR6Q14129 220 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 KEAP1Q14145 624 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 MINDY4Q4G0A6 757 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CYP27C1Q4G0S4 372 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 NKAIN1Q4KMZ8 207 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 DCST1Q5T197 706 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 DGAT2L6Q6ZPD8 337 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 OVCH1Q7RTY7 1134 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 OR10G2Q8NGC3 310 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 PTPMT1Q8WUK0 201 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CLIP3Q96DZ5 547 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 SENP5Q96HI0 755 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 PRRC1Q96M27 445 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 ALPK1Q96QP1 1244 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 CNPPD1Q9BV87 410 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 HOXD1Q9GZZ0 328 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 SLC26A1Q9H2B4 701 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 NMNAT1Q9HAN9 279 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 KRT84Q9NSB2 600 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 TMEFF2Q9UIK5 374 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 ERVK-19Q9WJR5 959 aa12.53□□□□□ -0.4
CCDC197-201ENST00000359253 ZNF443Q9Y2A4 671 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 PCDHGA10Q9Y5H3 936 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms