RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 TSPAN31Q12999 210 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 ELOCQ15369 112 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 PRICKLE4Q2TBC4 344 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 NIPAL1Q6NVV3 410 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF730Q6ZMV8 503 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF836Q6ZNA1 936 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF619Q8N2I2 560 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 TMEM52Q8NDY8 209 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 OR5T3Q8NGG3 340 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 PIGXQ8TBF5 258 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 TEX47Q8TBZ9 253 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 FNDC8Q8TC99 324 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 PMM1Q92871 262 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 ZG16BQ96DA0 208 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 LGALS12Q96DT0 336 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 IL4I1Q96RQ9 567 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 SDF2Q99470 211 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 ADAP2Q9NPF8 381 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 CTPS2Q9NRF8 586 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 C2orf42Q9NWW7 574 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 MAT2BQ9NZL9 334 aa13.9□□□□□ -0.19
GABPB1-202ENST00000359031 CFAP54Q96N23 3096 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 BLACEA4D250 179 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 LILRA5A6NI73 299 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 AGAP5A6NIR3 686 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 FRS3O43559 492 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 AIREO43918 545 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 LDB3O75112 727 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 COQ9O75208 318 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 STX11O75558 287 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 RPLP0P05388 317 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 DBIP07108 87 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 LSM3P62310 102 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 EEF1A1P68104 462 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 TUBA1BP68363 451 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 CDK5Q00535 292 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 GINS1Q14691 196 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 DECR1Q16698 335 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 SYT16Q17RD7 645 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 TRMT12Q53H54 448 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 DCST2Q5T1A1 773 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 RNLSQ5VYX0 342 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 TUBA1AQ71U36 451 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 ADCK1Q86TW2 530 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 GKN2Q86XP6 184 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 TMEFF1Q8IYR6 380 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 ARHGEF39Q8N4T4 335 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 FAM26EQ8N5C1 309 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 TCEANCQ8N8B7 351 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 ADAMTS18Q8TE60 1221 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 RLN3Q8WXF3 142 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 S100ZQ8WXG8 99 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 ACOT11Q8WXI4 607 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 MCHR1Q99705 422 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 PRRG3Q9BZD7 231 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 TPSD1Q9BZJ3 242 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 WDR12Q9GZL7 423 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 SAP130Q9H0E3 1048 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 POLE3Q9NRF9 147 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 DNAJC27Q9NZQ0 273 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 MKLN1Q9UL63 735 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 CLCA2Q9UQC9 943 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 MRPS17Q9Y2R5 130 aaKnown RBP13.89□□□□□ -0.19
GABPB1-202ENST00000359031 SLCO1B1Q9Y6L6 691 aa13.89□□□□□ -0.19
GABPB1-202ENST00000359031 A0A1W2PR77 199 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 KRBA1A5PL33 1030 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 SGK494L7N484 410 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 KIAA0513O60268 411 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 RDH16O75452 317 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 UBXN7O94888 489 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 SOX30O94993 753 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 NADKO95544 446 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 DBTP11182 482 aaKnown RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 GADD45AP24522 165 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 CD38P28907 300 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 CSTF2P33240 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 TRHRP34981 398 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 OPRL1P41146 370 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 CAPZBP47756 277 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 MAZP56270 477 aaKnown RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 RHAGQ02094 409 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 GAS6Q14393 721 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 NCF4Q15080 339 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 PRTGQ2VWP7 1150 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 RASSF6Q6ZTQ3 369 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 MRGPREQ86SM8 312 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 RANBP3LQ86VV4 465 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 MCATQ8IVS2 390 aaKnown RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 CLIP4Q8N3C7 705 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 FAM160A2Q8N612 972 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-202ENST00000359031 IQCF1Q8N6M8 205 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 COX18Q8N8Q8 333 aa13.88□□□□□ -0.19
GABPB1-202ENST00000359031 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms