RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PDLIM3Q53GG5 364 aaPredicted RBP9.28□□□□□ -0.92
CHD3-202ENST00000358181 SYPL2Q5VXT5 272 aa9.28□□□□□ -0.92
CHD3-202ENST00000358181 PRRT2Q7Z6L0 340 aaPredicted RBP9.28□□□□□ -0.92
CHD3-202ENST00000358181 RBM12BQ8IXT5 1001 aaKnown RBP9.28□□□□□ -0.92
CHD3-202ENST00000358181 LRRC52Q8N7C0 313 aa9.28□□□□□ -0.92
CHD3-202ENST00000358181 ZNF321PQ8N8H1 164 aa9.28□□□□□ -0.92
CHD3-202ENST00000358181 ZNF514Q96K75 400 aaPredicted RBP9.28□□□□□ -0.92
CHD3-202ENST00000358181 OBP2AQ9NY56 170 aa9.28□□□□□ -0.92
CHD3-202ENST00000358181 GABRQQ9UN88 632 aa9.28□□□□□ -0.92
CHD3-202ENST00000358181 MYH3P11055 1940 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 HAX1O00165 279 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 LRCH4O75427 683 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 CER1O95813 267 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 DUOXA1Q1HG43 343 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 TUSC1Q2TAM9 212 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 SLC18B1Q6NT16 456 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 TICAM1Q8IUC6 712 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 PLD5Q8N7P1 536 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 BANPQ8N9N5 519 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 DOHHQ9BU89 302 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 SALL4Q9UJQ4 1053 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 ACSL5Q9ULC5 683 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 PIAS3Q9Y6X2 628 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 SPATA31D1Q6ZQQ2 1576 aa9.27□□□□□ -0.92
CHD3-202ENST00000358181 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 DOK2O60496 412 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 GRPP07492 148 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 GSTM3P21266 225 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PBX2P40425 430 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 IL10RBQ08334 325 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 LY6G5CQ5SRR4 150 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SHEQ5VZ18 495 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PLEKHG7Q6ZR37 379 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PAPD5Q8NDF8 572 aaKnown RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 SLC29A3Q9BZD2 475 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 KIAA1456Q9P272 454 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 HEPACAM2A8MVW5 462 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 M0R233 179 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 BET1O15155 118 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SOCS5O75159 536 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PTH2RP49190 550 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 HES5Q5TA89 166 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 MAMDC2Q7Z304 686 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 FAM83FQ8NEG4 500 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 OR4K1Q8NGD4 311 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 OR9A1PQ8NGU1 263 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PRPF19Q9UMS4 504 aaKnown RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 RNF11Q9Y3C5 154 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PHLPP1O60346 1717 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 RNASEK-C17orf49H0YIS7 233 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 M0QZ24 198 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 CEBPDP49716 269 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 CDK6Q00534 326 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 ZNF829Q3KNS6 432 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 OR5L1Q8NGL2 311 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 INPP4AQ96PE3 977 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 MS4A12Q9NXJ0 267 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SULT2B1O00204 365 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SOCS6O14544 535 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 TXNL1O43396 289 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 ETV3P41162 512 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 EIF2DP41214 584 aaKnown RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 CDKN2CP42773 168 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 KIR2DL3P43628 341 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PCBP1Q15365 356 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHD3-202ENST00000358181 LARP4Q71RC2 724 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHD3-202ENST00000358181 RPS27LQ71UM5 84 aaKnown RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 OR6C4Q8NGE1 309 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SHARPINQ9H0F6 387 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 S100A14Q9HCY8 104 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 TXNRD2Q9NNW7 524 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 MEPEQ9NQ76 525 aaPredicted RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 THUMPD1Q9NXG2 353 aaKnown RBP9.27□□□□□ -0.93
CHD3-202ENST00000358181 MKLN1Q9UL63 735 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 LOC730098B7Z3J9 87 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 TRAPPC2LH3BP13 241 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 HSD17B6O14756 317 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 ANXA8P13928 327 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 CHATP28329 748 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 ACVRL1P37023 503 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 PRKCIP41743 596 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SOX9P48436 509 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 RAB35Q15286 201 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 LIN52Q52LA3 116 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 TMIGD1Q6UXZ0 262 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 ZADH2Q8N4Q0 377 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 SLC25A51Q9H1U9 297 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 EXTL2Q9UBQ6 330 aa9.27□□□□□ -0.93
CHD3-202ENST00000358181 MPIG6BO95866 241 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 AMY2AP04746 511 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 FBXO45P0C2W1 286 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 RPL35P42766 123 aaKnown RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 SIRPB2Q5JXA9 342 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ZNF517Q6ZMY9 492 aaPredicted RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 ZFP41Q8N8Y5 198 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GIMAP1Q8WWP7 306 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SYT3Q9BQG1 590 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 CD207Q9UJ71 328 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 B4GALT4O60513 344 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms