RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 MDGA1Q8NFP4 955 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PTERQ96BW5 349 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 SRPK3Q9UPE1 567 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 SPEF1Q9Y4P9 236 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 YY2O15391 372 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 RAB3BP20337 219 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 ERP29P30040 261 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 CNR2P34972 360 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 XCR1P46094 333 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 IRF4Q15306 451 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 CENPSQ8N2Z9 138 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 KAT6AQ92794 2004 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 RRNAD1Q96FB5 475 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 ANTXRLA6NF34 631 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PABPC4LP0CB38 370 aaKnown RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PNMTP11086 282 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 GCH1P30793 250 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PSPHP78330 225 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 TAP2Q03519 686 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PPA1Q15181 289 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 GCDHQ92947 438 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 NEIL2Q969S2 332 aa17.05■□□□□ 0.32
COL18A1-202ENST00000355480 MEPEQ9NQ76 525 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-202ENST00000355480 PHRF1Q9P1Y6 1649 aaKnown RBP17.04■□□□□ 0.32
COL18A1-202ENST00000355480 GSCP56915 257 aaPredicted RBP17.04■□□□□ 0.32
COL18A1-202ENST00000355480 CLDN10P78369 228 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 TDGQ13569 410 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 HTR3DQ70Z44 454 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 PNPLA1Q8N8W4 532 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 LMF1Q96S06 567 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 MGAT4CQ9UBM8 478 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 OSMP13725 252 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 DDCP20711 480 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 PLGLAQ15195 96 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 STK11Q15831 433 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 TANKQ92844 425 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 DTD2Q96FN9 168 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 SLC46A2Q9BY10 475 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 MAN2C1Q9NTJ4 1040 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 CRABP1P29762 137 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 PNCKQ6P2M8 343 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 MCATQ8IVS2 390 aaKnown RBP17.04■□□□□ 0.32
COL18A1-202ENST00000355480 CPXM2Q8N436 756 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 NPRL2Q8WTW4 380 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 TCEAL4Q96EI5 215 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 MACROD1Q9BQ69 325 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 ABCG5Q9H222 651 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 ERVK-19Q9WJR5 959 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 LOC102723532A0A0G2JNH3 316 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 MPPED1O15442 326 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 EFR3AQ14156 821 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 TMEM201Q5SNT2 666 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 MRPL21Q7Z2W9 205 aaKnown RBP17.04■□□□□ 0.32
COL18A1-202ENST00000355480 PHOSPHO2Q8TCD6 241 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 ISG20Q96AZ6 181 aaKnown RBP17.04■□□□□ 0.32
COL18A1-202ENST00000355480 RTP4Q96DX8 246 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 SORBS1Q9BX66 1292 aaKnown RBP17.04■□□□□ 0.32
COL18A1-202ENST00000355480 ACTR6Q9GZN1 396 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 CNIH4Q9P003 139 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 RIMS3Q9UJD0 308 aa17.04■□□□□ 0.32
COL18A1-202ENST00000355480 LDB3O75112 727 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ATG12O94817 140 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 LCN8Q6JVE9 175 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 VASH1Q7L8A9 365 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 SLC35F2Q8IXU6 374 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 GPR150Q8NGU9 434 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 OR5H2Q8NGV7 314 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 FAM71F1Q96KD3 344 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 DUSP23Q9BVJ7 150 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 NMNAT1Q9HAN9 279 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF160Q9HCG1 818 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ARMC1Q9NVT9 282 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 MCTS1Q9ULC4 181 aaKnown RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 PCDHA9Q9Y5H5 950 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 HSPE1-MOB4S4R3N1 261 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 A0A0A6YYH2 397 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 A6NJ64 397 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 F5H5K5 113 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 SULT2B1O00204 365 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 HSD17B1P14061 328 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 DAP3P51398 398 aaKnown RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 MRPL43Q8N983 215 aaKnown RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 GOLM1Q8NBJ4 401 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ABRACLQ9P1F3 81 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 B8ZZF3 427 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 UBL4AP11441 157 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 NADSYN1Q6IA69 706 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 PHC2Q8IXK0 858 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 PRSS38A1L453 326 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 SLC1A7O00341 560 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 MITFO75030 526 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 NUDT1P36639 197 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 GALNT1Q10472 559 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 PIN1Q13526 163 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-202ENST00000355480 BEST3Q8N1M1 668 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ACOT4Q8N9L9 421 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 SGCZQ96LD1 299 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms