RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 FAM78AQ5JUQ0 283 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 KIAA1549LQ6ZVL6 1849 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 ZNF513Q8N8E2 541 aaPredicted RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 SPRYD4Q8WW59 207 aaPredicted RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 PAWRQ96IZ0 340 aaKnown RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 SPATA5L1Q9BVQ7 753 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 PINK1Q9BXM7 581 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 NLKQ9UBE8 527 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 APOBEC3BQ9UH17 382 aaKnown RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC2A2P11168 524 aaPredicted RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 VEGFBP49765 207 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 RAB25P57735 213 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 KRT33BQ14525 404 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 AADACL4Q5VUY2 407 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 OR4N5Q8IXE1 308 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC16A11Q8NCK7 471 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 NACC2Q96BF6 587 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 TBX5Q99593 518 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 ATF6BQ99941 703 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 ENKD1Q9H0I2 346 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 NT5DC2Q9H857 520 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 MED20Q9H944 212 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 MRPS30Q9NP92 439 aaKnown RBP16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 CES1P1Q9UKY3 287 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 GSTK1Q9Y2Q3 226 aa16.94■□□□□ 0.3
PTP4A3-202ENST00000349124 SNRNP200O75643 2136 aaKnown RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 CARNS1A5YM72 827 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 DNAJB6O75190 326 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 GSTM3P21266 225 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 ATP6V1E1P36543 226 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 HTRA4P83105 476 aaPredicted RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 FZD5Q13467 585 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 ZIC1Q15915 447 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 PPP2R2DQ66LE6 453 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 VASNQ6EMK4 673 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 NOXA1Q86UR1 476 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 NR2C2APQ86WQ0 139 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 KLBQ86Z14 1044 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 KCT2Q8NC54 265 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 ENKURQ8TC29 256 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 ELP4Q96EB1 424 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC35A4Q96G79 324 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC38A2Q96QD8 506 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 SECISBP2Q96T21 854 aaKnown RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 SIRT4Q9Y6E7 314 aaPredicted RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 KDM4EB2RXH2 506 aaPredicted RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 CCNYL3P0C7X3 344 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 AHRP35869 848 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 HSD17B2P37059 387 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 RPS5P46782 204 aaKnown RBP16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 RAB28P51157 221 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 IL18Q14116 193 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 TRAM2Q15035 370 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 KIAA1211LQ6NV74 962 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 MRGPREQ86SM8 312 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 ARIH2OSQ8N7S6 290 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 OR52E1Q8NGJ3 308 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 MED18Q9BUE0 208 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC13A4Q9UKG4 626 aa16.93■□□□□ 0.3
PTP4A3-202ENST00000349124 SMLR1H3BR10 107 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 GABRPO00591 440 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 SURF4O15260 269 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 SEC14L5O43304 696 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 ALPPP05187 535 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 TATDN3Q17R31 274 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 MRM1Q6IN84 353 aaKnown RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 CD200R1LQ6Q8B3 271 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 RASSF6Q6ZTQ3 369 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 CPOQ8IVL8 374 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 NEIL3Q8TAT5 605 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 SMAP2Q8WU79 429 aaPredicted RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 SAMD8Q96LT4 415 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 RNF32Q9H0A6 362 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 NUP210Q8TEM1 1887 aaPredicted RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 OR6C70A6NIJ9 312 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 F3P13726 295 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 CSNK2A2P19784 350 aaPredicted RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 PEBP1P30086 187 aaKnown RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 PRMT2P55345 433 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 ARHGEF6Q15052 776 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 CCNJQ5T5M9 372 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 FAM111BQ6SJ93 734 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 GALNT6Q8NCL4 622 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 HINT3Q9NQE9 182 aaKnown RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 ENTPD4Q9Y227 616 aa16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 EXOSC1Q9Y3B2 195 aaKnown RBP16.92■□□□□ 0.3
PTP4A3-202ENST00000349124 LOC102723532A0A0G2JNH3 316 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 FGF9P31371 208 aaPredicted RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 TRA2BP62995 288 aaKnown RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 BTN3A2P78410 334 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 AGERQ15109 404 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 QPRTQ15274 297 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 IRF4Q15306 451 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 CCDC85BQ15834 202 aaPredicted RBP16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 LCN1P1Q5VSP4 162 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 SLC48A1Q6P1K1 146 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 TMEM91Q6ZNR0 172 aa16.91■□□□□ 0.3
PTP4A3-202ENST00000349124 C16orf62Q7Z3J2 963 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms