RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PAQR8Q8TEZ7 354 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 GTF2H4Q92759 462 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 GIMAP5Q96F15 307 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 RMND5BQ96G75 393 aaPredicted RBP10.89□□□□□ -0.67
SNCA-202ENST00000345009 SLC35A4Q96G79 324 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 C16orf58Q96GQ5 468 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 CCT8L2Q96SF2 557 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 ADOQ96SZ5 270 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 FAM173AQ9BQD7 235 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 YIPF4Q9BSR8 244 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 INPP5KQ9BT40 448 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 METTL7AQ9H8H3 244 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 SERHLQ9NQF3 203 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 GPATCH2Q9NW75 528 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 CORO2BQ9UQ03 480 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 CPAMD8Q8IZJ3 1885 aa10.89□□□□□ -0.67
SNCA-202ENST00000345009 BBIP1A8MTZ0 92 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 EVPLLA8MZ36 301 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 SUV39H1O43463 412 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 ASNA1O43681 348 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 ZNF354AO60765 605 aaPredicted RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 DCTN3O75935 186 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 IL33O95760 270 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 NPPAP01160 153 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 GSNP06396 782 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 MAP3K8P41279 467 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 ZFP36L2P47974 494 aaKnown RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 RFX3P48380 749 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 ST13P50502 369 aaKnown RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 HPCAP84074 193 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 CYLC2Q14093 348 aaPredicted RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 GNA13Q14344 377 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 DUSP5Q16690 384 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 COQ5Q5HYK3 327 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 SAXO2Q658L1 398 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 SLC2A7Q6PXP3 512 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 NPSR1Q6W5P4 371 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 C16orf62Q7Z3J2 963 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 WDR53Q7Z5U6 358 aaPredicted RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 PIGWQ7Z7B1 504 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 MTDHQ86UE4 582 aaKnown RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 SULF2Q8IWU5 870 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 FBXW8Q8N3Y1 598 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 ZNF843Q8N446 348 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 XAGE5Q8WWM1 108 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 CMTM5Q96DZ9 223 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 DOHHQ9BU89 302 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 NMUR2Q9GZQ4 415 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 HOXD1Q9GZZ0 328 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 TPT1P8Q9HAU6 139 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 SDHAF3Q9NRP4 125 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 BOKQ9UMX3 212 aaPredicted RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 LIPT1Q9Y234 373 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 CHCHD2Q9Y6H1 151 aaPredicted RBP10.88□□□□□ -0.67
SNCA-202ENST00000345009 SVILO95425 2214 aa10.88□□□□□ -0.67
SNCA-202ENST00000345009 ACOT7O00154 380 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 CLIC1O00299 241 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 TSPAN2O60636 221 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 UGT2B11O75310 529 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 NME6O75414 186 aaPredicted RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 SORBS2O94875 1100 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 KCNK2O95069 426 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 ACP2P11117 423 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 CAPN3P20807 821 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 ENDOUP21128 410 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 CDKN2CP42773 168 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 CRATP43155 626 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 UBAP2LQ14157 1087 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 INPP5JQ15735 1006 aaPredicted RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNCA-202ENST00000345009 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 DNAJC14Q6Y2X3 702 aaPredicted RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 PRICKLE2Q7Z3G6 844 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 MTERF4Q7Z6M4 381 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 SLC22A16Q86VW1 577 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 ZNF227Q86WZ6 799 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 RNF130Q86XS8 419 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 CISD2Q8N5K1 135 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 DPP10Q8N608 796 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 Q8NA96 180 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 ZNF527Q8NB42 609 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 OR4N2Q8NGD1 307 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 FBXO30Q8TB52 745 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 SPPL2AQ8TCT8 520 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 ZFP90Q8TF47 636 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 PIK3R3Q92569 461 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 CDS1Q92903 461 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 EFHD2Q96C19 240 aaPredicted RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 LRRC37BQ96QE4 947 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 OR7D2Q96RA2 312 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 SH3GL1Q99961 368 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 TRIM4Q9C037 500 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 OR51I1Q9H343 314 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms