RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 EFR3AQ14156 821 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 PTGR1Q14914 329 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 CHI3L2Q15782 390 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 NHSL2Q5HYW2 709 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 OR5M10Q6IEU7 315 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 OR7A2PQ8NGA2 310 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 OR10Q1Q8NGQ4 319 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 GIMAP5Q96F15 307 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 C14orf79Q96F83 325 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 PPP3R2Q96LZ3 170 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 RTN4RQ9BZR6 473 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 OR2B2Q9GZK3 357 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 CBLCQ9ULV8 474 aa13.13□□□□□ -0.31
HMGN3-202ENST00000344726 GXYLT2A0PJZ3 443 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 SCAMP2O15127 329 aaKnown RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 FADS1O60427 444 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 CBR3O75828 277 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 SERPINE1P05121 402 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 GABRA1P14867 456 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 GPC1P35052 558 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 KRT20P35900 424 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 MAP3K8P41279 467 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ASMTP46597 345 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ZFP36L2P47974 494 aaKnown RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 DLX5P56178 289 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 PSPHP78330 225 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 TLE4Q04727 773 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ACSF3Q4G176 576 aaPredicted RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ATP6AP1LQ52LC2 224 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 PLCZ1Q86YW0 608 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 DMRTC2Q8IXT2 367 aaPredicted RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 HOXB13Q92826 284 aaPredicted RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 MTERF3Q96E29 417 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ZBED6CLQ96FA7 236 aaPredicted RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 SORT1Q99523 831 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 KCNJ16Q9NPI9 418 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 EQTNQ9NQ60 294 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ACSS1Q9NUB1 689 aaPredicted RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 NTMQ9P121 344 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ATP6V1HQ9UI12 483 aa13.12□□□□□ -0.31
HMGN3-202ENST00000344726 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
HMGN3-202ENST00000344726 SPG11Q96JI7 2443 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 AHRRA9YTQ3 701 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 TMEM114B3SHH9 223 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 TM9SF1O15321 606 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 BIRC5O15392 142 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 SCO2O43819 266 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 HSPA4LO95757 839 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 IL33O95760 270 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 ACP2P11117 423 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 LAMP1P11279 417 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 PRPS2P11908 318 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 GRK2P25098 689 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 SSTR2P30874 369 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 GABRA3P34903 492 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 EVI2BP34910 448 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 MANFP55145 182 aaKnown RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 ABCE1P61221 599 aaKnown RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 RIPPLY2Q5TAB7 128 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 HOMEZQ8IX15 550 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 KRTCAP2Q8N6L1 136 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 FNDC5Q8NAU1 212 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 RELL2Q8NC24 303 aaPredicted RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 NUP43Q8NFH3 380 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 ZFP28Q8NHY6 868 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 FBXO30Q8TB52 745 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 PGM2Q96G03 612 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 Q9N2J8 555 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 SIRT3Q9NTG7 399 aaPredicted RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
HMGN3-202ENST00000344726 TEP1Q99973 2627 aaKnown RBP13.11□□□□□ -0.31
HMGN3-202ENST00000344726 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 CELSR1Q9NYQ6 3014 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 CCDC168Q8NDH2 2452 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 NKX2-2O95096 273 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 EPPINO95925 133 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 TUBBP07437 444 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 BGNP21810 368 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 MAPK1P28482 360 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 SRD5A2P31213 254 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 HPCAL1P37235 193 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 PRKAG1P54619 331 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms