RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 EN2P19622 333 aaPredicted RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 DDX6P26196 483 aaKnown RBP eCLIP7.74□□□□□ -1.17
HPS4-201ENST00000336873 PSMB10P40306 273 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 RAB28P51157 221 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 CLDN12P56749 244 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 RPL6Q02878 288 aaKnown RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 ST3GAL3Q11203 375 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 GRSF1Q12849 480 aaKnown RBP eCLIP7.74□□□□□ -1.17
HPS4-201ENST00000336873 ILF3Q12906 894 aaKnown RBP eCLIP7.74□□□□□ -1.17
HPS4-201ENST00000336873 IRF4Q15306 451 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 NXNL2Q5VZ03 156 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ESPNLQ6ZVH7 1005 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ZER1Q7Z7L7 766 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 COMMD2Q86X83 199 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 KLHDC8BQ8IXV7 354 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 BBS1Q8NFJ9 593 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 OR56A3Q8NH54 315 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ZNF563Q8TA94 476 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 TMEM255BQ8WV15 326 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 MCCC1Q96RQ3 725 aaPredicted RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 CDADC1Q9BWV3 514 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 IL23AQ9NPF7 189 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 CHD5Q8TDI0 1954 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 MYO16Q9Y6X6 1858 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 FAM86C2PA6NEL3 165 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 C11orf98E9PRG8 122 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 KIAA0355O15063 1070 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 OPN1LWP04000 364 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ARAFP10398 606 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ELAVL4P26378 380 aaKnown RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 GJA4P35212 333 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PTGS2P35354 604 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 DCDC1P59894 354 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 KCNC3Q14003 757 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 E2F2Q14209 437 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 MPEG1Q2M385 716 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SFRP4Q6FHJ7 346 aaPredicted RBP7.74□□□□□ -1.17
HPS4-201ENST00000336873 OR5M10Q6IEU7 315 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 USP53Q70EK8 1073 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 DPPA4Q7L190 304 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PRICKLE2Q7Z3G6 844 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SLC46A3Q7Z3Q1 461 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 TMC8Q8IU68 726 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PRR22Q8IZ63 422 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 DENND6BQ8NEG7 585 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SMARCD2Q92925 531 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 FKBP10Q96AY3 582 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 EPYCQ99645 322 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 PLA2G12AQ9BZM1 189 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 ANKMY1Q9P2S6 941 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 GRIP1Q9Y3R0 1128 aa7.74□□□□□ -1.17
HPS4-201ENST00000336873 SGK494L7N484 410 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 CSO75390 466 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 ARHGEF15O94989 841 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 KLF8O95600 359 aaPredicted RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 AIFM1O95831 613 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 PRKAR1AP10644 381 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 PCMT1P22061 227 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 MYL9P24844 172 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.73□□□□□ -1.17
HPS4-201ENST00000336873 CRYZQ08257 329 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 BAK1Q16611 211 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 TRMT12Q53H54 448 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 GDPD3Q7L5L3 318 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 AMIGO1Q86WK6 493 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 OR2L2Q8NH16 312 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 SPPL3Q8TCT6 385 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 APH1BQ8WW43 257 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 SPRYD4Q8WW59 207 aaPredicted RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 PDXPQ96GD0 296 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 PEX11GQ96HA9 241 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 MSLNLQ96KJ4 702 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 GSDMCQ9BYG8 508 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 SLIRPQ9GZT3 109 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 BRF2Q9HAW0 419 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 TMEM138Q9NPI0 162 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 PNO1Q9NRX1 252 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 GNG8Q9UK08 70 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 MGAT4BQ9UQ53 548 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 CMAHPQ9Y471 501 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 SPTAN1Q13813 2472 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 PATJQ8NI35 1801 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 A0A0B4J203 849 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 HMGN4O00479 90 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 PLGP00747 810 aaPredicted RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 CD3GP09693 182 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 ETV5P41161 510 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 ETV1P50549 477 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 MAT1AQ00266 395 aaKnown RBP7.73□□□□□ -1.17
HPS4-201ENST00000336873 RBBP4Q09028 425 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 FCHO2Q0JRZ9 810 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 OXA1LQ15070 435 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 PRSS53Q2L4Q9 553 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 TP53I3Q53FA7 332 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 LCN1P1Q5VSP4 162 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 FAM71E1Q6IPT2 247 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 CNIH2Q6PI25 160 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 TTLL10Q6ZVT0 673 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 LINGO2Q7L985 606 aa7.73□□□□□ -1.17
HPS4-201ENST00000336873 CEACAM19Q7Z692 300 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms