RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ZP2Q05996 745 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 OR4M2Q8NGB6 313 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 DCUN1D4Q92564 292 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MAELQ96JY0 434 aaKnown RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 MRGPRX2Q96LB1 330 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 HERPUD2Q9BSE4 406 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MARCH4Q9P2E8 410 aaPredicted RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 UBQLN2Q9UHD9 624 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 M0R3H8 397 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 STC2O76061 302 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 CAPNS1P04632 268 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 RNF4P78317 190 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 HOXC5Q00444 222 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MANEAQ5SRI9 462 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 LINC00696Q6ZRV3 163 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 OR52B6Q8NGF0 335 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MUS81Q96NY9 551 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 GPR22Q99680 433 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ZNF559Q9BR84 538 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 SLC29A3Q9BZD2 475 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ARL6Q9H0F7 186 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ACKR4Q9NPB9 350 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 AK6Q9Y3D8 172 aaKnown RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 A0A087WUU8 490 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 SPDEFO95238 335 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 TSPAN15O95858 294 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 RPA2P15927 270 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 CD79BP40259 229 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 RRAS2P62070 204 aaPredicted RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 PIP5KL1Q5T9C9 394 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 KIAA0319Q5VV43 1072 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 LYSMD4Q5XG99 296 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 MOB3CQ70IA8 216 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ZNF551Q7Z340 670 aaPredicted RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 ESX1Q8N693 406 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 NATD1Q8N6N6 113 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 IL17RDQ8NFM7 739 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 OR4K15Q8NH41 348 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 HHIPL1Q96JK4 782 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 DOHHQ9BU89 302 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ENKD1Q9H0I2 346 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 C12orf49Q9H741 205 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 GPR83Q9NYM4 423 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 PLEK2Q9NYT0 353 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 CD34P28906 385 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 TIA1P31483 386 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLN8-201ENST00000331222 DOC2AQ14183 400 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ZNF630Q2M218 657 aaPredicted RBP10.02□□□□□ -0.81
CLN8-201ENST00000331222 TP53I3Q53FA7 332 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 AKR1C8PQ5T2L2 129 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 ELP2Q6IA86 826 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 RDH14Q9HBH5 336 aa10.02□□□□□ -0.81
CLN8-201ENST00000331222 A0A0A6YYC8 382 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 I3L1I5 382 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 IMPA2O14732 288 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 SSX4O60224 188 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 PVRP15151 417 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 HES1Q14469 280 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 EXOSC7Q15024 291 aaKnown RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 ZNF791Q3KP31 576 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 PRAMEF20Q5VT98 475 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 CMASQ8NFW8 434 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 ANKRD30BLA7E2S9 258 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 SOCS5O75159 536 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 SLITRK5O94991 958 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 PFKMP08237 780 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 PBX1P40424 430 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 MAT1AQ00266 395 aaKnown RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 PAFAH1B3Q15102 231 aaKnown RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 KBTBD6Q86V97 674 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 OR9Q2Q8NGE9 314 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 ITFG2Q969R8 447 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 MALSU1Q96EH3 234 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 BSCL2Q96G97 398 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 KLHL21Q9UJP4 597 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 CSNK1G3Q9Y6M4 447 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 SLC9B1P1A6NJY1 282 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 SERPINA5P05154 406 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 P2RY14Q15391 338 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 PCGF3Q3KNV8 242 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 PXKQ7Z7A4 578 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 MFSD6LQ8IWD5 586 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 KDM1BQ8NB78 822 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 RSC1A1Q92681 617 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 TMEM100Q9NV29 134 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 KLHL42Q9P2K6 505 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 PCDHGB6Q9Y5F9 930 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 SULT2B1O00204 365 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 GJB3O75712 270 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 TSFMP43897 325 aaKnown RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 ZNF404Q494X3 552 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 FBXO43Q4G163 708 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 CD163Q86VB7 1156 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 ZNF689Q96CS4 500 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 H7C1Q1 480 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 TIMM8AO60220 97 aaPredicted RBP10.01□□□□□ -0.81
CLN8-201ENST00000331222 KIAA0513O60268 411 aa10.01□□□□□ -0.81
CLN8-201ENST00000331222 GALNT2Q10471 571 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms