RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 OR5K4A6NMS3 321 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 POM121CA8CG34 1229 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 DNASE2O00115 360 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 SGTAO43765 313 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 B4GALT2O60909 372 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 MTX2O75431 263 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 TGFB1P01137 390 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ATP1B2P14415 290 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 ZSWIM7Q19AV6 140 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 FAM27D1Q5T7N8 215 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 KIAA1161Q6NSJ0 714 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 DNAJB7Q7Z6W7 309 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 TMPRSS11BQ86T26 416 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 LINC00471Q8N535 108 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 WFDC5Q8TCV5 224 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 HAVCR2Q8TDQ0 301 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 PLD4Q96BZ4 506 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ALG14Q96F25 216 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 LCORQ96JN0 433 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 LYSMD1Q96S90 227 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 ACTR6Q9GZN1 396 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 SLAMF7Q9NQ25 335 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 DMRT3Q9NQL9 472 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 EMC3Q9P0I2 261 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 PIPOXQ9P0Z9 390 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 RGS17Q9UGC6 210 aaPredicted RBP12□□□□□ -0.49
CCDC60-201ENST00000327554 ICKQ9UPZ9 632 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 CHST2Q9Y4C5 530 aa12□□□□□ -0.49
CCDC60-201ENST00000327554 PRAMEF27A3QJZ7 478 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 CARNS1A5YM72 827 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 ANKDD1BA6NHY2 528 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SLC38A8A6NNN8 435 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 HMGN4O00479 90 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 COCHO43405 550 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 B3GALNT1O75752 331 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 LDOC1O95751 146 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 KLK1P06870 262 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 IRF1P10914 325 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 C4BPBP20851 252 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 GSTM3P21266 225 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 IMPA1P29218 277 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 CSKP41240 450 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 OR1G1P47890 313 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 MMP15P51511 669 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 KIAA1024LP59773 190 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 E2F1Q01094 437 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SFRP5Q5T4F7 317 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 RSPO2Q6UXX9 243 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 DGLUCYQ7Z3D6 616 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 APCDD1Q8J025 514 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 TBC1D19Q8N5T2 526 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 OR56A3Q8NH54 315 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 CNOT9Q92600 299 aaKnown RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 ATOH1Q92858 354 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 C7orf50Q9BRJ6 194 aaKnown RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 CHIAQ9BZP6 476 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SLC6A17Q9H1V8 727 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 ZCCHC4Q9H5U6 513 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 IFT22Q9H7X7 185 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 FAM8A1Q9UBU6 413 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SH2B3Q9UQQ2 575 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SCN10AQ9Y5Y9 1956 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 L7N2F9 121 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 INPPL1O15357 1258 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SOCS5O75159 536 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 PEX14O75381 377 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SLC16A8O95907 504 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 EPPINO95925 133 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 TFP02787 698 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 ATP5A1P25705 553 aaKnown RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 ERVFC1P60507 584 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 PTSQ03393 145 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SLC25A35Q3KQZ1 300 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 CLRN3Q8NCR9 226 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 BBS1Q8NFJ9 593 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 COQ8AQ8NI60 647 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 THAP4Q8WY91 577 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 RFKQ969G6 155 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 DPH7Q9BTV6 452 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 SPATA5L1Q9BVQ7 753 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 FAIM2Q9BWQ8 316 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 ZNF275Q9NSD4 429 aaPredicted RBP11.99□□□□□ -0.49
CCDC60-201ENST00000327554 PFDN2Q9UHV9 154 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 FBXL2Q9UKC9 423 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
CCDC60-201ENST00000327554 CEP350Q5VT06 3117 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TMEM202A6NGA9 273 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TEX46H3BTG2 121 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 AIPO00170 330 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 FOXE1O00358 373 aaPredicted RBP11.98□□□□□ -0.49
CCDC60-201ENST00000327554 PDCD5O14737 125 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 SELENOFO60613 162 aa11.98□□□□□ -0.49
CCDC60-201ENST00000327554 TBL1XO60907 577 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms