RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NAA50Q9GZZ1 169 aaKnown RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SERHL2Q9H4I8 314 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 THUMPD1Q9NXG2 353 aaKnown RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 MAT2BQ9NZL9 334 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 C19orf53Q9UNZ5 99 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-202ENST00000324340 FER1L5A0AVI2 2057 aa11.9□□□□□ -0.5
DDX39A-202ENST00000324340 SYNDIG1LA6NDD5 238 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 VSTM2BA6NLU5 285 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 GSTA4O15217 222 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 CREG1O75629 220 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 MT-CO3P00414 261 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 LDLRP01130 860 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 ALBP02768 609 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 HMGN2P05204 90 aaKnown RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 ARAFP10398 606 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 MAOAP21397 527 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 RAD23AP54725 363 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 GNG2P59768 71 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 DSTNP60981 165 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 RHAGQ02094 409 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 EIF3IQ13347 325 aaKnown RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 IL18R1Q13478 541 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 NEDD8Q15843 81 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF630Q2M218 657 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 TRMT12Q53H54 448 aaKnown RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 FAM111BQ6SJ93 734 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 CEACAM20Q6UY09 585 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 DGAT2L6Q6ZPD8 337 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 THAP5Q7Z6K1 395 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 SLC30A8Q8IWU4 369 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 CACTIN-AS1Q8N1I8 211 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 SPERTQ8NA61 448 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 NUP43Q8NFH3 380 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 GRPEL2Q8TAA5 225 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 CYGBQ8WWM9 190 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 HOXB13Q92826 284 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 RBM18Q96H35 190 aaKnown RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 SLC35G5Q96KT7 338 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF578Q96N58 590 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-202ENST00000324340 MS4A4EQ96PG1 132 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 BDH2Q9BUT1 245 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 SLC26A1Q9H2B4 701 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 C14orf105Q9NVL8 296 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 SLC39A1Q9NY26 324 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 ANAPC2Q9UJX6 822 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 LOXL2Q9Y4K0 774 aa11.89□□□□□ -0.51
DDX39A-202ENST00000324340 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 TCRBV16S1A1N1A0A5B0 115 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 AGRPO00253 132 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 MEN1O00255 615 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 HMGN4O00479 90 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 OR10H2O60403 315 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 CSO75390 466 aaKnown RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 RECKO95980 971 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 CT62P0C5K7 136 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 TRAPPC2P0DI81 140 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 TRAPPC2BP0DI82 140 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 CSRP1P21291 193 aaKnown RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 S1PR1P21453 382 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 NT5EP21589 574 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 TCEA1P23193 301 aaKnown RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 MAN2A2P49641 1150 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 KHKP50053 298 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 EFNA3P52797 238 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 CASP9P55211 416 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 RPS26P62854 115 aaKnown RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 VWA2Q5GFL6 755 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 FAM209AQ5JX71 171 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ZCCHC12Q6PEW1 402 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF517Q6ZMY9 492 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 SLC16A12Q6ZSM3 486 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 OVCH1Q7RTY7 1134 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 SLCO6A1Q86UG4 719 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 GALNT12Q8IXK2 581 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ADGRG5Q8IZF4 528 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 SPARTQ8N0X7 666 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 LGI4Q8N135 537 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 PLPP5Q8NEB5 264 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 RHOXF1Q8NHV9 184 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 NETO1Q8TDF5 533 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 FIG4Q92562 907 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 RIT1Q92963 219 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 MAL2Q969L2 176 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF566Q969W8 418 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 PTCHD1Q96NR3 888 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 DACH2Q96NX9 599 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 DGAT2Q96PD7 388 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ZPBPQ9BS86 351 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 DDA1Q9BW61 102 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 LHPPQ9H008 270 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 OR51I1Q9H343 314 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
DDX39A-202ENST00000324340 CTSFQ9UBX1 484 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms