RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 OR6C2Q9NZP2 312 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GIMAP2Q9UG22 337 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 TSPAN11A1L157 253 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 CPED1A4D0V7 1026 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 ARSBP15848 533 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF585AQ6P3V2 769 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF704Q6ZNC4 412 aaPredicted RBP16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF679Q8IYX0 411 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 SLAMF9Q96A28 289 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 MEIOCA2RUB1 952 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 TCEAL1Q15170 157 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 TSSK4Q6SA08 328 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF100Q8IYN0 542 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC7A5P1Q8MH63 180 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 ARL5BQ96KC2 179 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 AIG1Q9NVV5 245 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 OR6C65A6NJZ3 312 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 RAB6AP20340 208 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 RPS21P63220 83 aaKnown RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 CAMK2DQ13557 499 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SLAIN1Q8ND83 568 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 DDX1Q92499 740 aaKnown RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 AGPAT2O15120 278 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 ARHGEF15O94989 841 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 CLDN8P56748 225 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 RPS26P62854 115 aaKnown RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 MAMDC2Q7Z304 686 aaPredicted RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC35F2Q8IXU6 374 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SYNPRQ8TBG9 265 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 PLEKHJ1Q9NW61 149 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SCN8AQ9UQD0 1980 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 KRBOX1C9JBD0 128 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 ANHXE9PGG2 379 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 CAPNS1P04632 268 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 FAM109AQ8N4B1 249 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 HOXD1Q9GZZ0 328 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 MVB12BQ9H7P6 319 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 PRRT3Q5FWE3 981 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 IGFN1Q86VF2 1251 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 GPR52Q9Y2T5 361 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 LATO43561 262 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SNNO75324 88 aaPredicted RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC35E2BP0CK96 405 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 UBXN2BQ14CS0 331 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 RNF111Q6ZNA4 994 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 GCDHQ92947 438 aaPredicted RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 NSUN5Q96P11 429 aaKnown RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 BCAS3Q9H6U6 928 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 GCM1Q9NP62 436 aa16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF223Q9UK11 482 aaPredicted RBP16.03■□□□□ 0.16
SMCHD1-201ENST00000320876 E9PI62 339 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 SYNPO2LQ9H987 977 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 TRAV18A0A075B6X5 111 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 TP53P04637 393 aaPredicted RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 HLA-EP13747 358 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 POU3F4P49335 361 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 OR52E8Q6IFG1 317 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 RGMBQ6NW40 437 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 RDH10Q8IZV5 341 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 FOXRED1Q96CU9 486 aaPredicted RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 LMF1Q96S06 567 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 CLN5O75503 358 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 HLA-AP01891 365 aaKnown RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 MEF2AQ02078 507 aaPredicted RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 TATDN3Q17R31 274 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 SHFQ7M4L6 423 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF417Q8TAU3 575 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 SMAP2Q8WU79 429 aaPredicted RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 MSI2Q96DH6 328 aaKnown RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 L3HYPDHQ96EM0 354 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 CDHR4A6H8M9 788 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 RAB3DO95716 219 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 C1GALT1C1LP0DN25 315 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 EPHA1P21709 976 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF805Q5CZA5 627 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 CDCA2Q69YH5 1023 aaPredicted RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 LBX2Q6XYB7 198 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 IDO2Q6ZQW0 420 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 HUS1BQ8NHY5 278 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 NT5DC2Q9H857 520 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 INTS6Q9UL03 887 aaKnown RBP16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 KCTD3Q9Y597 815 aa16.02■□□□□ 0.16
SMCHD1-201ENST00000320876 A6NLC8 198 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 TOR1AO14656 332 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 NPC1O15118 1278 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 CDK5R2Q13319 367 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 CATSPEREQ5SY80 951 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 METTL2BQ6P1Q9 378 aaKnown RBP16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 BTF3L4Q96K17 158 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 PEBP4Q96S96 227 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 ZNF587Q96SQ5 575 aaPredicted RBP16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 TLR9Q9NR96 1032 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 PCDHAC2Q9Y5I4 1007 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 ATP6V1G2-DDX39BF2Z307 99 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 SERPINE2P07093 398 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 MPC1LP0DKB6 136 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 RAB3AP20336 220 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 GPR19Q15760 415 aa16.02■□□□□ 0.15
SMCHD1-201ENST00000320876 ZFP82Q8N141 532 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms