RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 TMEM125Q96AQ2 219 aa11.85□□□□□ -0.51
APTX-201ENST00000309615 COL21A1Q96P44 957 aa11.85□□□□□ -0.51
APTX-201ENST00000309615 RYDENQ9NUL5 291 aaKnown RBP11.85□□□□□ -0.51
APTX-201ENST00000309615 FLRT3Q9NZU0 649 aa11.85□□□□□ -0.51
APTX-201ENST00000309615 LUZP4Q9P127 313 aa11.85□□□□□ -0.51
APTX-201ENST00000309615 PCDHGB3Q9Y5G1 929 aa11.85□□□□□ -0.51
APTX-201ENST00000309615 GMEB1Q9Y692 573 aa11.85□□□□□ -0.51
APTX-201ENST00000309615 G3V3Y1 287 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 SOX30O94993 753 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 CBX6O95503 412 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 NPPAP01160 153 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 SP1P08047 785 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 CD46P15529 392 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 CPA2P48052 419 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 PNLIPRP2P54317 469 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 FUT5Q11128 374 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 PRAMEF20Q5VT98 475 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 BICRALQ6AI39 1079 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 OLIG3Q7RTU3 272 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 C16orf62Q7Z3J2 963 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 TEX19Q8NA77 164 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 PAQR8Q8TEZ7 354 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 SCMH1Q96GD3 660 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 C5orf34Q96MH7 638 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 NODALQ96S42 347 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 EFCAB1Q9HAE3 211 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 TIMMDC1Q9NPL8 285 aa11.84□□□□□ -0.51
APTX-201ENST00000309615 MRTO4Q9UKD2 239 aaKnown RBP11.84□□□□□ -0.51
APTX-201ENST00000309615 ATRXP46100 2492 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 A0A0G2JMM0 328 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 A0A1W2PPB8 328 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 A0A1W2PRS3 328 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 KIR3DP1A8MWS1 328 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 TP53I11O14683 189 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ABCB7O75027 752 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ICOSLGO75144 302 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 NUDT7P0C024 238 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 CYP4B1P13584 511 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 GPX2P18283 190 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 PPIBP23284 216 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 NUDT2P50583 147 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 PSMD4P55036 377 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 GPR85P60893 370 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 FADDQ13158 208 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 KRT72Q14CN4 511 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.83□□□□□ -0.52
APTX-201ENST00000309615 ARHGAP11BQ3KRB8 267 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ATAD3BQ5T9A4 648 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 SLC22A10Q63ZE4 541 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 SLC25A25Q6KCM7 469 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 HEPHL1Q6MZM0 1159 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 NANOGP8Q6NSW7 305 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 NUP54Q7Z3B4 507 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 GALNTL5Q7Z4T8 443 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 SPPL2AQ8TCT8 520 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 PNPLA2Q96AD5 504 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 SDF2Q99470 211 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 THUMPD3Q9BV44 507 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 NANOGQ9H9S0 305 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 DEPPQ9NTK1 212 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 EXD2Q9NVH0 621 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 GID8Q9NWU2 228 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 TAGLN3Q9UI15 199 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 CNOT11Q9UKZ1 510 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 EVPLLA8MZ36 301 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 NME2P1O60361 137 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 FCMRO60667 390 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 TNFRSF21O75509 655 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ZIC2O95409 532 aaPredicted RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 AGR2O95994 175 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 P04436 131 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 NME2P22392 152 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 MAGEA8P43361 318 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ANXA11P50995 505 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 DSTNP60981 165 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 KLRB1Q12918 225 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 NFATC3Q12968 1075 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ART3Q13508 389 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 EFR3AQ14156 821 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 SYPL1Q16563 259 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 RABL3Q5HYI8 236 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 TRPM8Q7Z2W7 1104 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ANKFN1Q8N957 763 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 Q8NA96 180 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 LSM14AQ8ND56 463 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 MAL2Q969L2 176 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 ROPN1LQ96C74 230 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 TMCO6Q96DC7 493 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 G6PC3Q9BUM1 346 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 RAD21L1Q9H4I0 556 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 PROK2Q9HC23 129 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 SACM1LQ9NTJ5 587 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 RALYQ9UKM9 306 aaKnown RBP11.83□□□□□ -0.52
APTX-201ENST00000309615 CORO2BQ9UQ03 480 aa11.83□□□□□ -0.52
APTX-201ENST00000309615 SPENQ96T58 3664 aaKnown RBP11.82□□□□□ -0.52
APTX-201ENST00000309615 UTS2O95399 124 aa11.82□□□□□ -0.52
APTX-201ENST00000309615 CASP3P42574 277 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms