RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 F5H5K5 113 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PENKP01210 267 aaPredicted RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 RPS27AP62979 156 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 UBA52P62987 128 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CSF1P09603 554 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 GAB1Q13480 694 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PDZD11Q5EBL8 140 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 OR1M1Q8NGA1 313 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SLC22A31A6NKX4 558 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 LOC730098B7Z3J9 87 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 XRCC3O43542 346 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 RAB3DO95716 219 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MAKP20794 623 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MAP4K2Q12851 820 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ADGRF1Q5T601 910 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MRPL21Q7Z2W9 205 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PLPP5Q8NEB5 264 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 FOXRED1Q96CU9 486 aaPredicted RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 OSGIN2Q9Y236 505 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MT-ND4P03905 459 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MMP3P08254 477 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 FBLP22087 321 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PPT1P50897 306 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 VAMP3Q15836 100 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 FAM69BQ5VUD6 431 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PNCKQ6P2M8 343 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CNKSR3Q6P9H4 555 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SSX7Q7RTT5 188 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PRTFDC1Q9NRG1 225 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 URGCP-MRPS24S4R325 110 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CLTCL1P53675 1640 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 FANCGO15287 622 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ADH5P11766 374 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SLC35A2P78381 396 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 FLI1Q01543 452 aaPredicted RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SCAPQ12770 1279 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF461Q8TAF7 563 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 IL26Q9NPH9 171 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 LYRM1O43325 122 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CLDN7O95471 211 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 OR4N5Q8IXE1 308 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SIDT1Q9NXL6 827 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MPIG6BO95866 241 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ANXA7P20073 488 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SLC18A1P54219 525 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF74Q16587 644 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MGLLQ99685 303 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 CLCF1Q9UBD9 225 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PRSS51A0A1B0GVH4 220 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 OAS1P00973 400 aaKnown RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 HLA-HP01893 362 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 FXNQ16595 210 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 MEIS2O14770 477 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 GDF10P55107 478 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 COL9A2Q14055 689 aaPredicted RBP12.75□□□□□ -0.37
TRIM56-201ENST00000306085 SLC25A18Q9H1K4 315 aa12.75□□□□□ -0.37
TRIM56-201ENST00000306085 PHYHO14832 338 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 L1CAMP32004 1257 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ARL2P36404 184 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 PLBD1Q6P4A8 553 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 EPGNQ6UW88 154 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 OR56B4Q8NH76 319 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 SYNPRQ8TBG9 265 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 FRS2Q8WU20 508 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 MIB2Q96AX9 1013 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF486Q96H40 463 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ARL2-SNX15V9GYD0 113 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 BMP4P12644 408 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 PREPP48147 710 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 MMP14P50281 582 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 NUP43Q8NFH3 380 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 BPIFCQ8NFQ6 507 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 CRB3Q9BUF7 120 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 TMEM235A6NFC5 223 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ABHD18Q0P651 414 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ILDR1Q86SU0 546 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 FAM185AQ8N0U4 392 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 TUSC2O75896 110 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 LCATP04180 440 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 PPP2CAP67775 309 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 SHEQ5VZ18 495 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 BRAT1Q6PJG6 821 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 DMBX1Q8NFW5 382 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 NKD2Q969F2 451 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ANKUB1A6NFN9 424 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 GALNT1Q10472 559 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-201ENST00000306085 SMIM12Q96EX1 92 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 DOHHQ9BU89 302 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 ASB4Q9Y574 426 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 WNT10BO00744 389 aa12.74□□□□□ -0.37
TRIM56-201ENST00000306085 SLC24A5Q71RS6 500 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms